RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 NOL8Q76FK4 1167 aaKnown RBP9.16□□□□□ -0.94
CDC42-201ENST00000315554 GPR142Q7Z601 462 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 NBPF11Q86T75 865 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 CMTR1Q8N1G2 835 aaKnown RBP9.16□□□□□ -0.94
CDC42-201ENST00000315554 MB21D1Q8N884 522 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 C22orf23Q9BZE7 217 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 MCOLN1Q9GZU1 580 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 SLC38A10Q9HBR0 1119 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 ZNF214Q9UL59 606 aaPredicted RBP9.16□□□□□ -0.94
CDC42-201ENST00000315554 RIPK3Q9Y572 518 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 A0A0G2JMZ2 1700 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 ZNF536O15090 1300 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 WDR19Q8NEZ3 1342 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 COL11A1P12107 1806 aaPredicted RBP9.16□□□□□ -0.94
CDC42-201ENST00000315554 PALM3A6NDB9 673 aaPredicted RBP9.15□□□□□ -0.94
CDC42-201ENST00000315554 KLRF2D3W0D1 207 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 PLA2G6O60733 806 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 DDAH1O94760 285 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 CCNA1P78396 465 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 PDE4CQ08493 712 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 TOB2Q14106 344 aaPredicted RBP9.15□□□□□ -0.94
CDC42-201ENST00000315554 CDC37Q16543 378 aaPredicted RBP9.15□□□□□ -0.94
CDC42-201ENST00000315554 GPATCH4Q5T3I0 446 aaKnown RBP9.15□□□□□ -0.94
CDC42-201ENST00000315554 APOA5Q6Q788 366 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 PLEKHH3Q7Z736 793 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 SGMS1Q86VZ5 419 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 HOMER1Q86YM7 354 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 ADGRF4Q8IZF3 695 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 TMTC2Q8N394 836 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 CCDC82Q8N4S0 544 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 CTCFLQ8NI51 663 aaPredicted RBP9.15□□□□□ -0.94
CDC42-201ENST00000315554 COA7Q96BR5 231 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 MTA3Q9BTC8 594 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 RANBP17Q9H2T7 1088 aaKnown RBP9.15□□□□□ -0.94
CDC42-201ENST00000315554 JMJD4Q9H9V9 463 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 PTCH2Q9Y6C5 1203 aa9.15□□□□□ -0.94
CDC42-201ENST00000315554 hCG_1642624A0A1W2PR95 340 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 GOLGA8AA7E2F4 631 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 GOLGA8BA8MQT2 603 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 DTNBO60941 627 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 PPFIA3O75145 1194 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 MYCP01106 439 aaPredicted RBP9.15□□□□□ -0.95
CDC42-201ENST00000315554 ALAS1P13196 640 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 CYP2B6P20813 491 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 MAPK4P31152 587 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 FLT3LGP49771 235 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 ANAPC15P60006 121 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 STK3Q13188 491 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 USH1GQ495M9 461 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 SYNE3Q6ZMZ3 975 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 RIOX2Q8IUF8 465 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 PIGSQ96S52 555 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 TEX13BQ9BXU2 312 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 BACH2Q9BYV9 841 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 TM6SF1Q9BZW5 370 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 SRRDQ9UH36 339 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 CCPG1Q9ULG6 757 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 PTPN22Q9Y2R2 807 aa9.15□□□□□ -0.95
CDC42-201ENST00000315554 ZBTB43O43298 467 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 CYTH3O43739 400 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 PGK2P07205 417 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 ELNP15502 786 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 PTPREP23469 700 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 CDC27P30260 824 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 NEK4P51957 841 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 ARHGEF6Q15052 776 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 QRICH1Q2TAL8 776 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 MUM1L1Q5H9M0 696 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 SRBD1Q8N5C6 995 aaKnown RBP9.14□□□□□ -0.95
CDC42-201ENST00000315554 FANCBQ8NB91 859 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 SHCBP1Q8NEM2 672 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 RAET1EQ8TD07 263 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 KIF2CQ99661 725 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 UPF2Q9HAU5 1272 aaKnown RBP9.14□□□□□ -0.95
CDC42-201ENST00000315554 NCOA5Q9HCD5 579 aaKnown RBP9.14□□□□□ -0.95
CDC42-201ENST00000315554 RNF146Q9NTX7 359 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 HPS5Q9UPZ3 1129 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 IVNS1ABPQ9Y6Y0 642 aa9.14□□□□□ -0.95
CDC42-201ENST00000315554 MGAMO43451 1857 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 ATP2A1O14983 1001 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 PPP1R11O60927 126 aaPredicted RBP9.13□□□□□ -0.95
CDC42-201ENST00000315554 SLC25A27O95847 323 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 ICAM1P05362 532 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 CALM1P0DP23 149 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 CALM2P0DP24 149 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 CALM3P0DP25 149 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 HOXD10P28358 340 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 ADORA2AP29274 412 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 KIF5BP33176 963 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 METAP2P50579 478 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDC42-201ENST00000315554 AK2P54819 239 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 CCT2P78371 535 aaKnown RBP9.13□□□□□ -0.95
CDC42-201ENST00000315554 CCL14Q16627 93 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 RTN1Q16799 776 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 MORN1Q5T089 497 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 FBXO46Q6PJ61 603 aaPredicted RBP9.13□□□□□ -0.95
CDC42-201ENST00000315554 TMTC3Q6ZXV5 915 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 TNS4Q8IZW8 715 aa9.13□□□□□ -0.95
CDC42-201ENST00000315554 SH3TC2Q8TF17 1288 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms