RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 USP17L15C9J2P7 530 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 USP17L13C9JLJ4 530 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 USP17L11C9JVI0 530 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 USP17L18D6R9N7 530 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 USP17L22D6RA61 530 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 USP17L17D6RBQ6 530 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 USP17L19D6RCP7 530 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 USP17L20D6RJB6 530 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 MYO1CO00159 1063 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 SHOX2O60902 331 aaPredicted RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 PARNO95453 639 aaKnown RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 USP14P54578 494 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 GJA9P57773 515 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 USP17L24Q0WX57 530 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 NFIAQ12857 509 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 TRDNQ13061 729 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 BMS1Q14692 1282 aaKnown RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 LRRC8AQ8IWT6 810 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 ANKRD44Q8N8A2 993 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 SYAP1Q96A49 352 aaPredicted RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 CHAMP1Q96JM3 812 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 SRCIN1Q9C0H9 1055 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 SEMA4AQ9H3S1 761 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 CD320Q9NPF0 282 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 SMC4Q9NTJ3 1288 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 LRRFIP2Q9Y608 721 aaKnown RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 FANCMQ8IYD8 2048 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 MROH7-TTC4A0A0A0MT08 1334 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 LOC102724159A0A0B4J2E5 919 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 TRIM6-TRIM34B2RNG4 842 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 F8W031 263 aaPredicted RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 TLR3O15455 904 aaKnown RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 NEMFO60524 1076 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 ZNF865P0CJ78 1059 aaPredicted RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 PBX2P40425 430 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 MAGEA9P43362 315 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 MKRN4PQ13434 485 aaPredicted RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 PWP2Q15269 919 aaKnown RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 PUM3Q15397 648 aaKnown RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 CCDC144BQ3MJ40 725 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 BEND3Q5T5X7 828 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 ISM2Q6H9L7 571 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 TRIM65Q6PJ69 517 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 SAMD1Q6SPF0 538 aaPredicted RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 CCDC144CPQ8IYA2 1237 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 SP7Q8TDD2 431 aaPredicted RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 STAG1Q8WVM7 1258 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 MYCBPQ99417 103 aaPredicted RBP4.84□□□□□ -1.63
POLR2B-201ENST00000314595 BPIFA3Q9BQP9 254 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 TRIM34Q9BYJ4 488 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 SLC28A3Q9HAS3 691 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 TMOD4Q9NZQ9 345 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 PIEZO1Q92508 2521 aa4.84□□□□□ -1.63
POLR2B-201ENST00000314595 ARVCFO00192 962 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 SDSP20132 328 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 CORO7P57737 925 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 ATP2B2Q01814 1243 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 PTPN11Q06124 597 aaPredicted RBP4.84□□□□□ -1.64
POLR2B-201ENST00000314595 TATDN1Q6P1N9 297 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 UBE3BQ7Z3V4 1068 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 PLCD3Q8N3E9 789 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 PORCNQ9H237 461 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 RASSF4Q9H2L5 321 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 UBE2ZQ9H832 354 aaPredicted RBP4.84□□□□□ -1.64
POLR2B-201ENST00000314595 TMEM39AQ9NV64 488 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 EXOC6BQ9Y2D4 811 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 MYH7P12883 1935 aa4.84□□□□□ -1.64
POLR2B-201ENST00000314595 PI4KAP2A4QPH2 592 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 CCDC172P0C7W6 258 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 ADCYAP1R1P41586 468 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 CLCN6P51797 869 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 ERVK-21P61565 698 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 Q3C1V9 767 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 ZNF792Q3KQV3 632 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 SYT10Q6XYQ8 523 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 ZNF771Q7L3S4 317 aaPredicted RBP4.83□□□□□ -1.64
POLR2B-201ENST00000314595 MIGA2Q7L4E1 593 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 PI4KAP1Q8N8J0 262 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 PCSK9Q8NBP7 692 aaKnown RBP4.83□□□□□ -1.64
POLR2B-201ENST00000314595 CACTINQ8WUQ7 758 aaKnown RBP4.83□□□□□ -1.64
POLR2B-201ENST00000314595 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.83□□□□□ -1.64
POLR2B-201ENST00000314595 DENND2AQ9ULE3 1009 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 CEP83Q9Y592 693 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 TTC41PQ6P2S7 1318 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 PRR23AA6NEV1 266 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 DUSP11O75319 330 aaKnown RBP4.83□□□□□ -1.64
POLR2B-201ENST00000314595 TADA3O75528 432 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 CAVIN2O95810 425 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 SLC25A27O95847 323 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 FGBP02675 491 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 AKR1A1P14550 325 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 HSPA4P34932 840 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 ACLYP53396 1101 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 FOXP4Q8IVH2 680 aaPredicted RBP4.83□□□□□ -1.64
POLR2B-201ENST00000314595 FAM200AQ8TCP9 573 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 SMARCE1Q969G3 411 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 MAML3Q96JK9 1138 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 AGBL1Q96MI9 1066 aa4.83□□□□□ -1.64
POLR2B-201ENST00000314595 MAF1Q9H063 256 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms