RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 SPRED3Q2MJR0 410 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 DNAJC7Q99615 494 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 AGPAT5Q9NUQ2 364 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 ATRNO75882 1429 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 CYLC1P35663 651 aaPredicted RBP20.06■□□□□ 0.8
SPSB4-201ENST00000310546 CCDC96Q2M329 555 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 CEP120Q8N960 986 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 TPX2Q9ULW0 747 aaKnown RBP20.06■□□□□ 0.8
SPSB4-201ENST00000310546 FAM205CA6NFA0 338 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 MDH1P40925 334 aaKnown RBP20.06■□□□□ 0.8
SPSB4-201ENST00000310546 GUCY2FP51841 1108 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 C8orf74Q6P047 294 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 NFRKBQ6P4R8 1299 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 APPBP2Q92624 585 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 EEF2KMTQ96G04 330 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 NHEJ1Q9H9Q4 299 aaPredicted RBP20.06■□□□□ 0.8
SPSB4-201ENST00000310546 NFU1Q9UMS0 254 aa20.06■□□□□ 0.8
SPSB4-201ENST00000310546 FAM153BP0C7A2 387 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 FAM153CQ494X1 144 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 INTS5Q6P9B9 1019 aaKnown RBP20.05■□□□□ 0.8
SPSB4-201ENST00000310546 PAGR1Q9BTK6 254 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 FAM153AQ9UHL3 310 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 WDR19Q8NEZ3 1342 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 DNM1LO00429 736 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 TRIM21P19474 475 aaKnown RBP20.05■□□□□ 0.8
SPSB4-201ENST00000310546 HAUS3Q68CZ6 603 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 SH3RF1Q7Z6J0 888 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 TRIM22Q8IYM9 498 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 WASF1Q92558 559 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 TBC1D31Q96DN5 1066 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 CYFIP2Q96F07 1278 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 FOXP1Q9H334 677 aaPredicted RBP20.05■□□□□ 0.8
SPSB4-201ENST00000310546 ZNHIT6Q9NWK9 470 aaKnown RBP20.05■□□□□ 0.8
SPSB4-201ENST00000310546 RWDD2AQ9UIY3 292 aa20.05■□□□□ 0.8
SPSB4-201ENST00000310546 THRAP3Q9Y2W1 955 aaKnown RBP20.05■□□□□ 0.8
SPSB4-201ENST00000310546 C4AP0C0L4 1744 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 C4BP0C0L5 1744 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 FMNL1O95466 1100 aaPredicted RBP20.04■□□□□ 0.8
SPSB4-201ENST00000310546 IL15P40933 162 aaPredicted RBP20.04■□□□□ 0.8
SPSB4-201ENST00000310546 CCNHP51946 323 aaPredicted RBP20.04■□□□□ 0.8
SPSB4-201ENST00000310546 SCARF1Q14162 830 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 CCDC57Q2TAC2 916 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 GIGYF2Q6Y7W6 1299 aaKnown RBP20.04■□□□□ 0.8
SPSB4-201ENST00000310546 KRT26Q7Z3Y9 468 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 MB21D1Q8N884 522 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 LRWD1Q9UFC0 647 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 CAPN6Q9Y6Q1 641 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 ZSCAN5CA6NGD5 496 aaPredicted RBP20.04■□□□□ 0.8
SPSB4-201ENST00000310546 OPLAHO14841 1288 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 ZFYP08048 801 aaPredicted RBP20.04■□□□□ 0.8
SPSB4-201ENST00000310546 SARNPP82979 210 aaKnown RBP20.04■□□□□ 0.8
SPSB4-201ENST00000310546 NLRP10Q86W26 655 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 IGDCC4Q8TDY8 1250 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 ISCA1Q9BUE6 129 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 GREM2Q9H772 168 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 LY9Q9HBG7 655 aa20.04■□□□□ 0.8
SPSB4-201ENST00000310546 TRIM49BA6NDI0 452 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 BACH1O14867 736 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 ADORA1P30542 326 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 ZAP70P43403 619 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 CARSP49589 748 aaKnown RBP20.03■□□□□ 0.8
SPSB4-201ENST00000310546 CAVIN3Q969G5 261 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 OSBPL7Q9BZF2 842 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 QTRT2Q9H974 415 aaKnown RBP20.03■□□□□ 0.8
SPSB4-201ENST00000310546 AATFQ9NY61 560 aaKnown RBP eCLIP20.03■□□□□ 0.8
SPSB4-201ENST00000310546 TRPC5Q9UL62 973 aaPredicted RBP20.03■□□□□ 0.8
SPSB4-201ENST00000310546 IFIT3O14879 490 aaKnown RBP20.03■□□□□ 0.8
SPSB4-201ENST00000310546 PARP1P09874 1014 aaKnown RBP20.03■□□□□ 0.8
SPSB4-201ENST00000310546 MAATS1Q7Z4T9 603 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 IQCKQ8N0W5 287 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 GJD4Q96KN9 370 aaPredicted RBP20.03■□□□□ 0.8
SPSB4-201ENST00000310546 CAPN11Q9UMQ6 739 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 TRIM75PA6NK02 468 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 C6orf89Q6UWU4 347 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 BARGINQ6ZT62 677 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 PCMTD1Q96MG8 357 aaPredicted RBP20.03■□□□□ 0.8
SPSB4-201ENST00000310546 OSBPL9Q96SU4 736 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 MLXIPQ9HAP2 919 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 GDAQ9Y2T3 454 aa20.03■□□□□ 0.8
SPSB4-201ENST00000310546 RTN2O75298 545 aa20.02■□□□□ 0.8
SPSB4-201ENST00000310546 CCDC50Q8IVM0 306 aa20.02■□□□□ 0.8
SPSB4-201ENST00000310546 RBM12Q9NTZ6 932 aaKnown RBP20.02■□□□□ 0.8
SPSB4-201ENST00000310546 BCCIPQ9P287 314 aaKnown RBP eCLIP20.02■□□□□ 0.8
SPSB4-201ENST00000310546 DOT1LQ8TEK3 1739 aa20.02■□□□□ 0.8
SPSB4-201ENST00000310546 ANKRD18BA2A2Z9 1011 aa20.02■□□□□ 0.79
SPSB4-201ENST00000310546 MOCS3O95396 460 aa20.02■□□□□ 0.79
SPSB4-201ENST00000310546 GCKP35557 465 aa20.02■□□□□ 0.79
SPSB4-201ENST00000310546 GPIHBP1Q8IV16 184 aa20.02■□□□□ 0.79
SPSB4-201ENST00000310546 TRIM58Q8NG06 486 aa20.02■□□□□ 0.79
SPSB4-201ENST00000310546 ACTR5Q9H9F9 607 aaPredicted RBP20.02■□□□□ 0.79
SPSB4-201ENST00000310546 CCDC87Q9NVE4 849 aa20.02■□□□□ 0.79
SPSB4-201ENST00000310546 IRS4O14654 1257 aaPredicted RBP20.01■□□□□ 0.79
SPSB4-201ENST00000310546 TACC1O75410 805 aa20.01■□□□□ 0.79
SPSB4-201ENST00000310546 GLI1P08151 1106 aa20.01■□□□□ 0.79
SPSB4-201ENST00000310546 DRP2Q13474 957 aa20.01■□□□□ 0.79
SPSB4-201ENST00000310546 TMEM87BQ96K49 555 aa20.01■□□□□ 0.79
SPSB4-201ENST00000310546 ATP6V1G3Q96LB4 118 aa20.01■□□□□ 0.79
SPSB4-201ENST00000310546 EPB41L5Q9HCM4 733 aa20.01■□□□□ 0.79
SPSB4-201ENST00000310546 IFNAR1P17181 557 aa20.01■□□□□ 0.79
SPSB4-201ENST00000310546 PAFAH1B1P43034 410 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms