RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 TBC1D8O95759 1140 aa17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 PLCG2P16885 1265 aa17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 STIM1Q13586 685 aa17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 FAM163AQ96GL9 167 aaPredicted RBP17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 AK8Q96MA6 479 aa17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 MMTAG2Q9BU76 263 aaKnown RBP17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.33
SPIRE1-201ENST00000309836 FOCADQ5VW36 1801 aa17.08■□□□□ 0.32
SPIRE1-201ENST00000309836 CHMP4BP1P59074 171 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 ZNF771Q7L3S4 317 aaPredicted RBP17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 NEK8Q86SG6 692 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 NOC3LQ8WTT2 800 aaKnown RBP17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 DHTKD1Q96HY7 919 aaPredicted RBP17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 DNAJC7Q99615 494 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 C7orf25Q9BPX7 421 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 TRIM9Q9C026 710 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 ZSWIM4Q9H7M6 989 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 VAT1LQ9HCJ6 419 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 TMEM260Q9NX78 707 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 USP21Q9UK80 565 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 CTAGE9A4FU28 777 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 ATP8B1O43520 1251 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 KIF20AO95235 890 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 TFRCP02786 760 aaKnown RBP17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 SMARCA1P28370 1054 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 UBA5Q9GZZ9 404 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 PUF60Q9UHX1 559 aaKnown RBP17.07■□□□□ 0.32
SPIRE1-201ENST00000309836 UBR3Q6ZT12 1888 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 CCNE1P24864 410 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 GNA11P29992 359 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 OR8K1Q8NGG5 319 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 TBCKQ8TEA7 893 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 P2RX5Q93086 422 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 RBM17Q96I25 401 aaKnown RBP17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 NAPGQ99747 312 aaPredicted RBP17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 UBXN6Q9BZV1 441 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 RIOX1Q9H6W3 641 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 MAGEC2Q9UBF1 373 aaPredicted RBP17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 BIN2Q9UBW5 565 aaPredicted RBP17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 SEC63Q9UGP8 760 aaKnown RBP17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 CAPN11Q9UMQ6 739 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 LTBP1Q14766 1721 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 PLIN4Q96Q06 1357 aa17.06■□□□□ 0.32
SPIRE1-201ENST00000309836 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 ESYT2A0FGR8 921 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 RASSF10A6NK89 507 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 B4DLN1 442 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 NDUFA10O95299 355 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 SRGNP10124 158 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 TECP42680 631 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 ASIC1P78348 528 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 PDE4DQ08499 809 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 STK4Q13043 487 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 TUBB2AQ13885 445 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 SOGA3Q5TF21 947 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 ANKRD40Q6AI12 368 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 WDR59Q6PJI9 974 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 CEP112Q8N8E3 955 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 TBC1D16Q8TBP0 767 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 TUBB2BQ9BVA1 445 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 ANKZF1Q9H8Y5 726 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 EXOC1Q9NV70 894 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 TRIM10Q9UDY6 481 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 EPN1Q9Y6I3 576 aaPredicted RBP17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 LRRC37AA6NMS7 1700 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 EDIL3O43854 480 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 SERPINB2P05120 415 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 FCER1AP12319 257 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 GYS1P13807 737 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 ADRA2BP18089 450 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 CSGALNACT2Q8N6G5 542 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 TTYH3Q9C0H2 523 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 PODXL2Q9NZ53 605 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 MYO1AQ9UBC5 1043 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 DAGLAQ9Y4D2 1042 aa17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 FRMPD2Q68DX3 1309 aaPredicted RBP17.05■□□□□ 0.32
SPIRE1-201ENST00000309836 PES1O00541 588 aaKnown RBP17.04■□□□□ 0.32
SPIRE1-201ENST00000309836 PDHBP11177 359 aa17.04■□□□□ 0.32
SPIRE1-201ENST00000309836 DNM2P50570 870 aa17.04■□□□□ 0.32
SPIRE1-201ENST00000309836 HERVK_113P62684 666 aa17.04■□□□□ 0.32
SPIRE1-201ENST00000309836 ST5P78524 1137 aa17.04■□□□□ 0.32
SPIRE1-201ENST00000309836 AMPD2Q01433 879 aa17.04■□□□□ 0.32
SPIRE1-201ENST00000309836 ORC2Q13416 577 aaPredicted RBP17.04■□□□□ 0.32
SPIRE1-201ENST00000309836 REXO1Q8N1G1 1221 aaKnown RBP17.04■□□□□ 0.32
SPIRE1-201ENST00000309836 TUBGCP2Q9BSJ2 902 aa17.04■□□□□ 0.32
SPIRE1-201ENST00000309836 LUC7L2Q9Y383 392 aaKnown RBP17.04■□□□□ 0.32
SPIRE1-201ENST00000309836 KLK7P49862 253 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 GRB10Q13322 594 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 SLF2Q8IX21 1173 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 HPS3Q969F9 1004 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 CCDC47Q96A33 483 aaKnown RBP17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 CNOT6LQ96LI5 555 aaKnown RBP17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 PNMA5Q96PV4 448 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 MTMR9Q96QG7 549 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 IGKV6D-41A0A0C4DH26 115 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms