RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 RIC8AQ9NPQ8 531 aa25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 CNOT7Q9UIV1 285 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 PCDHA1Q9Y5I3 950 aa25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 LTBP3Q9NS15 1303 aa25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 TAL1P17542 331 aaPredicted RBP25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 CCDC144BQ3MJ40 725 aa25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 BMP6P22004 513 aa25.46■■□□□ 1.67
PDLIM2-202ENST00000308354 RPS12P25398 132 aaKnown RBP25.46■■□□□ 1.67
PDLIM2-202ENST00000308354 TNNI2P48788 182 aa25.46■■□□□ 1.67
PDLIM2-202ENST00000308354 KIAA1524Q8TCG1 905 aa25.46■■□□□ 1.67
PDLIM2-202ENST00000308354 PSTPIP2Q9H939 334 aa25.46■■□□□ 1.67
PDLIM2-202ENST00000308354 ARHGEF10LQ9HCE6 1279 aa25.46■■□□□ 1.67
PDLIM2-202ENST00000308354 ZNF541Q9H0D2 1346 aa25.46■■□□□ 1.67
PDLIM2-202ENST00000308354 SLFN14P0C7P3 912 aa25.45■■□□□ 1.67
PDLIM2-202ENST00000308354 LRMPQ12912 555 aa25.45■■□□□ 1.67
PDLIM2-202ENST00000308354 ELOA2Q8IYF1 753 aaPredicted RBP25.45■■□□□ 1.67
PDLIM2-202ENST00000308354 CUL5Q93034 780 aa25.45■■□□□ 1.67
PDLIM2-202ENST00000308354 GLIS2Q9BZE0 524 aaPredicted RBP25.45■■□□□ 1.67
PDLIM2-202ENST00000308354 TBC1D12O60347 775 aa25.45■■□□□ 1.66
PDLIM2-202ENST00000308354 LONP1P36776 959 aaKnown RBP25.45■■□□□ 1.66
PDLIM2-202ENST00000308354 NCAPHQ15003 741 aa25.45■■□□□ 1.66
PDLIM2-202ENST00000308354 PPP1R18Q6NYC8 613 aa25.45■■□□□ 1.66
PDLIM2-202ENST00000308354 PAGE5Q96GU1 130 aa25.45■■□□□ 1.66
PDLIM2-202ENST00000308354 MAN1B1Q9UKM7 699 aa25.45■■□□□ 1.66
PDLIM2-202ENST00000308354 USP17L15C9J2P7 530 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 USP17L13C9JLJ4 530 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 USP17L11C9JVI0 530 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 USP17L18D6R9N7 530 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 USP17L22D6RA61 530 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 USP17L17D6RBQ6 530 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 USP17L19D6RCP7 530 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 USP17L20D6RJB6 530 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 EDIL3O43854 480 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 NEMFO60524 1076 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 CAP2P40123 477 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 USP17L24Q0WX57 530 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 KANK3Q6NY19 840 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 USP17L6PQ6QN14 398 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 SMARCE1Q969G3 411 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 R3HCC1Q9Y3T6 440 aaKnown RBP25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 KARSQ15046 597 aaKnown RBP25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 USH1GQ495M9 461 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 SYDE2Q5VT97 1194 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 POTEDQ86YR6 584 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 TMX2Q9Y320 296 aa25.44■■□□□ 1.66
PDLIM2-202ENST00000308354 E2F4Q16254 413 aa25.43■■□□□ 1.66
PDLIM2-202ENST00000308354 TEPSINQ96N21 525 aa25.43■■□□□ 1.66
PDLIM2-202ENST00000308354 TDP2O95551 362 aa25.43■■□□□ 1.66
PDLIM2-202ENST00000308354 OR52Z1P0C646 297 aa25.43■■□□□ 1.66
PDLIM2-202ENST00000308354 MRPL12P52815 198 aaKnown RBP25.43■■□□□ 1.66
PDLIM2-202ENST00000308354 FAM83BQ5T0W9 1011 aa25.43■■□□□ 1.66
PDLIM2-202ENST00000308354 SPTLC3Q9NUV7 552 aa25.43■■□□□ 1.66
PDLIM2-202ENST00000308354 HACL1Q9UJ83 578 aa25.43■■□□□ 1.66
PDLIM2-202ENST00000308354 ARFGEF1Q9Y6D6 1849 aa25.42■■□□□ 1.66
PDLIM2-202ENST00000308354 SARSP49591 514 aaKnown RBP25.42■■□□□ 1.66
PDLIM2-202ENST00000308354 CLK2P49760 499 aaKnown RBP25.42■■□□□ 1.66
PDLIM2-202ENST00000308354 DPF2Q92785 391 aa25.42■■□□□ 1.66
PDLIM2-202ENST00000308354 PLIN2Q99541 437 aa25.42■■□□□ 1.66
PDLIM2-202ENST00000308354 ARHGAP27Q6ZUM4 889 aa25.41■■□□□ 1.66
PDLIM2-202ENST00000308354 SH3RF1Q7Z6J0 888 aa25.41■■□□□ 1.66
PDLIM2-202ENST00000308354 IQUBQ8NA54 791 aa25.41■■□□□ 1.66
PDLIM2-202ENST00000308354 SMTNL1A8MU46 457 aa25.41■■□□□ 1.66
PDLIM2-202ENST00000308354 LAD1O00515 517 aa25.41■■□□□ 1.66
PDLIM2-202ENST00000308354 SLC37A4O43826 429 aa25.41■■□□□ 1.66
PDLIM2-202ENST00000308354 NT5DC1Q5TFE4 455 aa25.41■■□□□ 1.66
PDLIM2-202ENST00000308354 SAMD1Q6SPF0 538 aaPredicted RBP25.41■■□□□ 1.66
PDLIM2-202ENST00000308354 PRR12Q9ULL5 1215 aa25.41■■□□□ 1.66
PDLIM2-202ENST00000308354 IKBKBO14920 756 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 TECP42680 631 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 KIF4BQ2VIQ3 1234 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 RASSF8Q8NHQ8 419 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 CACTINQ8WUQ7 758 aaKnown RBP25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 BLZF1Q9H2G9 400 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 GOPCQ9HD26 462 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 TXLNAP40222 546 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 PRPHP41219 470 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 MAP3K10Q02779 954 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 TNFAIP1Q13829 316 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 PDXDC2PQ6P474 469 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 MTRQ99707 1265 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 AMNQ9BXJ7 453 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 HSD3B7Q9H2F3 369 aa25.4■■□□□ 1.66
PDLIM2-202ENST00000308354 PHF20L1A8MW92 1017 aa25.39■■□□□ 1.66
PDLIM2-202ENST00000308354 LMOD1P29536 600 aaPredicted RBP25.39■■□□□ 1.66
PDLIM2-202ENST00000308354 TXKP42681 527 aa25.39■■□□□ 1.66
PDLIM2-202ENST00000308354 STAT2P52630 851 aa25.39■■□□□ 1.66
PDLIM2-202ENST00000308354 TPM4P67936 248 aa25.39■■□□□ 1.66
PDLIM2-202ENST00000308354 FBXO11Q86XK2 927 aa25.39■■□□□ 1.66
PDLIM2-202ENST00000308354 UBA7P41226 1012 aa25.39■■□□□ 1.65
PDLIM2-202ENST00000308354 DNTTIP2Q5QJE6 756 aaKnown RBP25.39■■□□□ 1.65
PDLIM2-202ENST00000308354 BTNL9Q6UXG8 535 aa25.39■■□□□ 1.65
PDLIM2-202ENST00000308354 SPATA20Q8TB22 786 aa25.39■■□□□ 1.65
PDLIM2-202ENST00000308354 CCDC34Q96HJ3 373 aa25.39■■□□□ 1.65
PDLIM2-202ENST00000308354 DEFB129Q9H1M3 183 aa25.39■■□□□ 1.65
PDLIM2-202ENST00000308354 MORC3Q14149 939 aa25.38■■□□□ 1.65
PDLIM2-202ENST00000308354 ARID5BQ14865 1188 aa25.38■■□□□ 1.65
PDLIM2-202ENST00000308354 PRAMEF18Q5VWM3 479 aa25.38■■□□□ 1.65
PDLIM2-202ENST00000308354 FILIP1Q7Z7B0 1213 aa25.38■■□□□ 1.65
PDLIM2-202ENST00000308354 XPO4Q9C0E2 1151 aaKnown RBP25.38■■□□□ 1.65
PDLIM2-202ENST00000308354 IFNKQ9P0W0 207 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms