RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 BOLA2Q9H3K6 86 aa11.34□□□□□ -0.59
TEFM-201ENST00000306049 CERS4Q9HA82 394 aa11.34□□□□□ -0.59
TEFM-201ENST00000306049 CD320Q9NPF0 282 aa11.34□□□□□ -0.59
TEFM-201ENST00000306049 CTDP1Q9Y5B0 961 aaPredicted RBP11.34□□□□□ -0.59
TEFM-201ENST00000306049 SLC4A4Q9Y6R1 1079 aa11.34□□□□□ -0.59
TEFM-201ENST00000306049 TET1Q8NFU7 2136 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 F5H6K3 240 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 CCER2I3L3R5 266 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 ZBED4O75132 1171 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 ALADP13716 330 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 ATP2A2P16615 1042 aaKnown RBP11.33□□□□□ -0.6
TEFM-201ENST00000306049 NKX3-2P78367 333 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 BEX3Q00994 111 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 KLRC3Q07444 240 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 TMEM67Q5HYA8 995 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 KRT40Q6A162 431 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 ANKRD35Q8N283 1001 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 KATNBL1Q9H079 304 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 RAVER2Q9HCJ3 691 aaKnown RBP11.33□□□□□ -0.6
TEFM-201ENST00000306049 NYAP2Q9P242 653 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 UMODL1Q5DID0 1318 aa11.33□□□□□ -0.6
TEFM-201ENST00000306049 CA3P07451 260 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 ATP5JP18859 108 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 RASA1P20936 1047 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 SSTR3P32745 418 aaPredicted RBP11.32□□□□□ -0.6
TEFM-201ENST00000306049 CCL23P55773 120 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 UBE3CQ15386 1083 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 CCDC144CPQ8IYA2 1237 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 RPUSD2Q8IZ73 545 aaKnown RBP11.32□□□□□ -0.6
TEFM-201ENST00000306049 GJD3Q8N144 294 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 STK11IPQ8N1F8 1099 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 SLC43A3Q8NBI5 491 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 KIFC2Q96AC6 838 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 HAUS7Q99871 368 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 HIPK3Q9H422 1215 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 SLC38A10Q9HBR0 1119 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 ARPP21Q9UBL0 812 aaPredicted RBP11.32□□□□□ -0.6
TEFM-201ENST00000306049 FBXO40Q9UH90 709 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 PTPRSQ13332 1948 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 BRWD1Q9NSI6 2320 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 ASTN1O14525 1302 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 TANC1Q9C0D5 1861 aa11.32□□□□□ -0.6
TEFM-201ENST00000306049 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.31□□□□□ -0.6
TEFM-201ENST00000306049 CNTN2Q02246 1040 aa11.31□□□□□ -0.6
TEFM-201ENST00000306049 TNFAIP2Q03169 654 aa11.31□□□□□ -0.6
TEFM-201ENST00000306049 SBK1Q52WX2 424 aa11.31□□□□□ -0.6
TEFM-201ENST00000306049 CXCL17Q6UXB2 119 aa11.31□□□□□ -0.6
TEFM-201ENST00000306049 NOL8Q76FK4 1167 aaKnown RBP11.31□□□□□ -0.6
TEFM-201ENST00000306049 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
TEFM-201ENST00000306049 PANK1Q8TE04 598 aa11.31□□□□□ -0.6
TEFM-201ENST00000306049 ARNTL2Q8WYA1 636 aa11.31□□□□□ -0.6
TEFM-201ENST00000306049 PUS7LQ9H0K6 701 aaKnown RBP11.31□□□□□ -0.6
TEFM-201ENST00000306049 MKNK2Q9HBH9 465 aa11.31□□□□□ -0.6
TEFM-201ENST00000306049 CLIP2Q9UDT6 1046 aa11.31□□□□□ -0.6
TEFM-201ENST00000306049 FEM1BQ9UK73 627 aa11.31□□□□□ -0.6
TEFM-201ENST00000306049 SCN10AQ9Y5Y9 1956 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 IGKV6D-41A0A0C4DH26 115 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 EPOPA6NHQ4 379 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 RAB11FIP3O75154 756 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 CABYRO75952 493 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 OAZ1P54368 228 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 ITGA7Q13683 1181 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 ZSCAN25Q6NSZ9 544 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
TEFM-201ENST00000306049 WNT8AQ9H1J5 351 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 HOMER2Q9NSB8 354 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 GRIN2DO15399 1336 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 COL4A4P53420 1690 aaPredicted RBP11.3□□□□□ -0.6
TEFM-201ENST00000306049 USP34Q70CQ2 3546 aa11.3□□□□□ -0.6
TEFM-201ENST00000306049 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 ST18O60284 1047 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 B4GALT4O60513 344 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 HMMRO75330 724 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 PTGS1P23219 599 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 FSCN1Q16658 493 aaKnown RBP11.29□□□□□ -0.6
TEFM-201ENST00000306049 SIRT2Q8IXJ6 389 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 FAM178BQ8IXR5 827 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 RPAP2Q8IXW5 612 aaPredicted RBP11.29□□□□□ -0.6
TEFM-201ENST00000306049 LRRC47Q8N1G4 583 aaKnown RBP11.29□□□□□ -0.6
TEFM-201ENST00000306049 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 CEP95Q96GE4 821 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 STRBPQ96SI9 672 aaKnown RBP11.29□□□□□ -0.6
TEFM-201ENST00000306049 AP5M1Q9H0R1 490 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 TRPV6Q9H1D0 765 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 ACAD9Q9H845 621 aa11.29□□□□□ -0.6
TEFM-201ENST00000306049 GNEQ9Y223 722 aaKnown RBP11.29□□□□□ -0.6
TEFM-201ENST00000306049 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
TEFM-201ENST00000306049 ASB14A6NK59 587 aa11.28□□□□□ -0.6
TEFM-201ENST00000306049 GSG1L2A8MUP6 293 aa11.28□□□□□ -0.6
TEFM-201ENST00000306049 DYNC1LI2O43237 492 aaPredicted RBP11.28□□□□□ -0.6
TEFM-201ENST00000306049 ZEB2O60315 1214 aa11.28□□□□□ -0.6
TEFM-201ENST00000306049 PSMC6P62333 389 aa11.28□□□□□ -0.6
TEFM-201ENST00000306049 FOXK2Q01167 660 aa11.28□□□□□ -0.6
TEFM-201ENST00000306049 GRB10Q13322 594 aa11.28□□□□□ -0.6
TEFM-201ENST00000306049 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
TEFM-201ENST00000306049 ZNF444Q8N0Y2 327 aaPredicted RBP11.28□□□□□ -0.6
TEFM-201ENST00000306049 GMCL1P1Q8NEA9 526 aa11.28□□□□□ -0.6
TEFM-201ENST00000306049 MKL1Q969V6 931 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms