RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 MYO1CO00159 1063 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 PCP11498 1178 aaKnown RBP14.7□□□□□ -0.06
DDX54-201ENST00000306014 CTNNA2P26232 953 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 KRT71Q3SY84 523 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 ZNF622Q969S3 477 aaKnown RBP eCLIP14.7□□□□□ -0.061e-6■■□□□ 13.1
DDX54-201ENST00000306014 NUCKS1Q9H1E3 243 aaKnown RBP14.7□□□□□ -0.06
DDX54-201ENST00000306014 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.7□□□□□ -0.06
DDX54-201ENST00000306014 UTP11Q9Y3A2 253 aaKnown RBP14.7□□□□□ -0.06
DDX54-201ENST00000306014 GRIPAP1Q4V328 841 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 SAMD15Q9P1V8 674 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 FRMPD2Q68DX3 1309 aaPredicted RBP14.69□□□□□ -0.06
DDX54-201ENST00000306014 ZBTB22O15209 634 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 CHMP2AO43633 222 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 FLOT1O75955 427 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 ZBED6P86452 979 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 HAUS3Q68CZ6 603 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 MB21D1Q8N884 522 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 KCNK9Q9NPC2 374 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 ATP8A2Q9NTI2 1148 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 FBXO2Q9UK22 296 aaPredicted RBP14.69□□□□□ -0.06
DDX54-201ENST00000306014 TNFAIP3P21580 790 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 GJC1P36383 396 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 ARHGAP25P42331 645 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 LRRC41Q15345 812 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 ISCA1Q9BUE6 129 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 MRPL44Q9H9J2 332 aaKnown RBP14.69□□□□□ -0.06
DDX54-201ENST00000306014 PARP3Q9Y6F1 533 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 GSG1L2A8MUP6 293 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 SEMA3EO15041 775 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 CTNNA1P35221 906 aaKnown RBP14.69□□□□□ -0.06
DDX54-201ENST00000306014 SLC7A5Q01650 507 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 RETREG2Q8NC44 543 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 HPS5Q9UPZ3 1129 aa14.69□□□□□ -0.06
DDX54-201ENST00000306014 FAM205CA6NFA0 338 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 MOCS3O95396 460 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 PPP1R7Q15435 360 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 ZRSR2Q15696 482 aaKnown RBP14.68□□□□□ -0.06
DDX54-201ENST00000306014 CCDC91Q7Z6B0 441 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 TC2NQ8N9U0 490 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 STMN4Q9H169 189 aaPredicted RBP14.68□□□□□ -0.06
DDX54-201ENST00000306014 CALCOCO2Q13137 446 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 ENAHQ8N8S7 591 aaPredicted RBP14.68□□□□□ -0.06
DDX54-201ENST00000306014 HDAC6Q9UBN7 1215 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 PCDHB13Q9Y5F0 798 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 ABCC12Q96J65 1359 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 PRCPP42785 496 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 MAP3K9P80192 1104 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 COL9A3Q14050 684 aaPredicted RBP14.68□□□□□ -0.06
DDX54-201ENST00000306014 KRT12Q99456 494 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.68□□□□□ -0.063e-11■■■■■ 371
DDX54-201ENST00000306014 DISC1Q9NRI5 854 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 PCDHA12Q9UN75 941 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 FRMD4BQ9Y2L6 1034 aa14.68□□□□□ -0.06
DDX54-201ENST00000306014 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 APBA3O96018 575 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 PLCG1P19174 1290 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 FAM182BQ5T319 152 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 SUSD4Q5VX71 490 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 GALNT17Q6IS24 598 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 HOOK3Q86VS8 718 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 CNBD1Q8NA66 436 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 IGDCC4Q8TDY8 1250 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 L2HGDHQ9H9P8 463 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 DIP2AQ14689 1571 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 CCNE1P24864 410 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 EIF4A3P38919 411 aaKnown RBP14.67□□□□□ -0.06
DDX54-201ENST00000306014 CRKLP46109 303 aaKnown RBP14.67□□□□□ -0.06
DDX54-201ENST00000306014 FAM26FQ5R3K3 315 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 TMTC3Q6ZXV5 915 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 GPBP1Q86WP2 473 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 CPDO75976 1380 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 LOC102724428A0A0B4J2F2 783 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 CYP2C19P33261 490 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 SIK1P57059 783 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 GSPT2Q8IYD1 628 aaKnown RBP14.67□□□□□ -0.06
DDX54-201ENST00000306014 LRRC47Q8N1G4 583 aaKnown RBP14.67□□□□□ -0.06
DDX54-201ENST00000306014 SMCR8Q8TEV9 937 aaPredicted RBP14.67□□□□□ -0.06
DDX54-201ENST00000306014 EPB41L5Q9HCM4 733 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 ZBTB21Q9ULJ3 1066 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 DNM3Q9UQ16 869 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 ATP6V0A2Q9Y487 856 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 JRKLQ9Y4A0 524 aa14.67□□□□□ -0.06
DDX54-201ENST00000306014 VIRMAQ69YN4 1812 aaKnown RBP14.67□□□□□ -0.06
DDX54-201ENST00000306014 TTC26A0AVF1 554 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 HGSO14964 777 aaPredicted RBP14.66□□□□□ -0.06
DDX54-201ENST00000306014 GCNT3O95395 438 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 USP17L8P0C7I0 530 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 ABCB4P21439 1286 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 GRIN1Q05586 938 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 NAP1L4Q99733 375 aaKnown RBP14.66□□□□□ -0.06
DDX54-201ENST00000306014 THRAP3Q9Y2W1 955 aaKnown RBP14.66□□□□□ -0.06
DDX54-201ENST00000306014 SPOPO43791 374 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 CALUO43852 315 aaPredicted RBP14.66□□□□□ -0.06
DDX54-201ENST00000306014 NMT2O60551 498 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 VSNL1P62760 191 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 ZNF772Q68DY9 489 aaPredicted RBP14.66□□□□□ -0.06
DDX54-201ENST00000306014 CCDC170Q8IYT3 715 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 BICD1Q96G01 975 aa14.66□□□□□ -0.06
DDX54-201ENST00000306014 NAP1L3Q99457 506 aaPredicted RBP14.66□□□□□ -0.06
DDX54-201ENST00000306014 THAP9Q9H5L6 903 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms