RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 ANKRD20A12PQ8NF67 263 aa16.02■□□□□ 0.15
RAB40A-201ENST00000304236 CCDC51Q96ER9 411 aa16.02■□□□□ 0.15
RAB40A-201ENST00000304236 KCNQ5Q9NR82 932 aa16.02■□□□□ 0.15
RAB40A-201ENST00000304236 MAD2L2Q9UI95 211 aa16.02■□□□□ 0.15
RAB40A-201ENST00000304236 RWDD2AQ9UIY3 292 aa16.02■□□□□ 0.15
RAB40A-201ENST00000304236 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.15
RAB40A-201ENST00000304236 ITIH6Q6UXX5 1313 aa16.01■□□□□ 0.15
RAB40A-201ENST00000304236 CCDC194A0A1B0GVG4 234 aa16.01■□□□□ 0.15
RAB40A-201ENST00000304236 LAD1O00515 517 aa16.01■□□□□ 0.15
RAB40A-201ENST00000304236 CAPN15O75808 1086 aa16.01■□□□□ 0.15
RAB40A-201ENST00000304236 ELF2Q15723 593 aa16.01■□□□□ 0.15
RAB40A-201ENST00000304236 ZNF658Q5TYW1 1059 aaPredicted RBP16.01■□□□□ 0.15
RAB40A-201ENST00000304236 SAMD7Q7Z3H4 446 aa16.01■□□□□ 0.15
RAB40A-201ENST00000304236 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
RAB40A-201ENST00000304236 M0R2N6 131 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 MYL1P05976 194 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 TPM1P09493 284 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 PLCG2P16885 1265 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 STX17P56962 302 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 GRM1Q13255 1194 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 IL17AQ16552 155 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 RRAGBQ5VZM2 374 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 CYP4F22Q6NT55 531 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 IGSF22Q8N9C0 903 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 LIMA1Q9UHB6 759 aaKnown RBP16■□□□□ 0.15
RAB40A-201ENST00000304236 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
RAB40A-201ENST00000304236 LRRC10BA6NIK2 292 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 VIL1P09327 827 aaKnown RBP16■□□□□ 0.15
RAB40A-201ENST00000304236 ATP2B4P23634 1241 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 CASP1P29466 404 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 CASQ1P31415 396 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 PTPN21Q16825 1174 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 TBC1D10BQ4KMP7 808 aaPredicted RBP16■□□□□ 0.15
RAB40A-201ENST00000304236 DTHD1Q6ZMT9 781 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 SAPCD2Q86UD0 394 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 CCDC12Q8WUD4 166 aaPredicted RBP16■□□□□ 0.15
RAB40A-201ENST00000304236 DYNLL2Q96FJ2 89 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 ZNF408Q9H9D4 720 aa16■□□□□ 0.15
RAB40A-201ENST00000304236 TRPM7Q96QT4 1865 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 TEX33O43247 280 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 STAT6P42226 847 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 PAK1Q13153 545 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 KMT5BQ4FZB7 885 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 CNGA4Q8IV77 575 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 SLF2Q8IX21 1173 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 STAG2Q8N3U4 1231 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 MNS1Q8NEH6 495 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 TGFBRAP1Q8WUH2 860 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 BEGAINQ9BUH8 593 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 BARHL2Q9NY43 387 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.99■□□□□ 0.15
RAB40A-201ENST00000304236 CTNND2Q9UQB3 1225 aa15.99■□□□□ 0.15
RAB40A-201ENST00000304236 V9GYY5 206 aaPredicted RBP15.99■□□□□ 0.15
RAB40A-201ENST00000304236 SPDYE4A6NLX3 237 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 URI1O94763 535 aaPredicted RBP15.98■□□□□ 0.15
RAB40A-201ENST00000304236 RPN1P04843 607 aaKnown RBP15.98■□□□□ 0.15
RAB40A-201ENST00000304236 CCDC175P0C221 793 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 SMARCA1P28370 1054 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 PRPHP41219 470 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 LBX1P52954 281 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 RBM26Q5T8P6 1007 aaKnown RBP15.98■□□□□ 0.15
RAB40A-201ENST00000304236 GPKOWQ92917 476 aaPredicted RBP eCLIP15.98■□□□□ 0.15
RAB40A-201ENST00000304236 HHIPL1Q96JK4 782 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 TMEM47Q9BQJ4 181 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 PCDHA6Q9UN73 950 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 PCDHA8Q9Y5H6 950 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 PCNTO95613 3336 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 MAP2K2P36507 400 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 GNG11P61952 73 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 RBL2Q08999 1139 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 TRIM14Q14142 442 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 WWC2Q6AWC2 1192 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 FBXO38Q6PIJ6 1188 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 TOGARAM2Q6ZUX3 1019 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 SMYD4Q8IYR2 804 aaPredicted RBP15.98■□□□□ 0.15
RAB40A-201ENST00000304236 UBXN4Q92575 508 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 DCPSQ96C86 337 aaKnown RBP15.98■□□□□ 0.15
RAB40A-201ENST00000304236 SPZ1Q9BXG8 430 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 CCSER1Q9C0I3 900 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 BLZF1Q9H2G9 400 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 MAGEF1Q9HAY2 307 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 DISC1Q9NRI5 854 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 FAM205AQ6ZU69 1335 aa15.98■□□□□ 0.15
RAB40A-201ENST00000304236 GPR75-ASB3A0A0A6YYF3 556 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 EFCAB8A8MWE9 144 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 STXBP3O00186 592 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 H2AFXP16104 143 aaPredicted RBP15.97■□□□□ 0.15
RAB40A-201ENST00000304236 RASA1P20936 1047 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 KCNB1Q14721 858 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 DIXDC1Q155Q3 683 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 ERCC6LQ2NKX8 1250 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 KRT26Q7Z3Y9 468 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 STAMQ92783 540 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 MTRQ99707 1265 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 GTPBP4Q9BZE4 634 aaKnown RBP15.97■□□□□ 0.15
RAB40A-201ENST00000304236 ZMYND15Q9H091 742 aa15.97■□□□□ 0.15
RAB40A-201ENST00000304236 CUEDC2Q9H467 287 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms