RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ANKRD13CQ8N6S4 541 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 SNX25Q9H3E2 840 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 LMCD1Q9NZU5 365 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 ZBTB12Q9Y330 459 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-201ENST00000303354 LRRN2O75325 713 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 RSPH3Q86UC2 560 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 TEX2Q8IWB9 1127 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 RETREG2Q8NC44 543 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 KMT5AQ9NQR1 393 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 TACC3Q9Y6A5 838 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 MAD1L1Q9Y6D9 718 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 GH2P01242 217 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 SOS2Q07890 1332 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-201ENST00000303354 PRAG1Q86YV5 1406 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 ERLEC1Q96DZ1 483 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 U2AF2P26368 475 aaKnown RBP eCLIP8.58□□□□□ -1.041e-6■■■□□ 19.1
SCN9A-201ENST00000303354 ZNF157P51786 506 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-201ENST00000303354 CLUL1Q15846 466 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 ADALQ6DHV7 355 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 KIAA1524Q8TCG1 905 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 H7C0C1 242 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 MAGEA1P43355 309 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 ATP5OP48047 213 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 PDCD6IPQ8WUM4 868 aaKnown RBP8.58□□□□□ -1.04
SCN9A-201ENST00000303354 HAUS1Q96CS2 278 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 CHL1O00533 1208 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 MECOMQ03112 1051 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 CEP85LQ5SZL2 805 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 BANK1Q8NDB2 785 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 RILPQ96NA2 401 aa8.58□□□□□ -1.04
SCN9A-201ENST00000303354 ZNF18P17022 549 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 ARHGEF6Q15052 776 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 KLHL40Q2TBA0 621 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 GKAP1Q5VSY0 366 aaPredicted RBP8.57□□□□□ -1.04
SCN9A-201ENST00000303354 SFMBT2Q5VUG0 894 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 PUS7LQ9H0K6 701 aaKnown RBP8.57□□□□□ -1.04
SCN9A-201ENST00000303354 TMEM62Q0P6H9 643 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 SCN4BQ8IWT1 228 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 HESX1Q9UBX0 185 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 ABCC10Q5T3U5 1492 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 KRT15P19012 456 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 ODR4Q5SWX8 454 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 RAET1EQ8TD07 263 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 TESK2Q96S53 571 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 BMP3P12645 472 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 CRKP46108 304 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 STAT2P52630 851 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 KRT26Q7Z3Y9 468 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 FANCBQ8NB91 859 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 PRPF31Q8WWY3 499 aaKnown RBP8.57□□□□□ -1.04
SCN9A-201ENST00000303354 NEK8Q86SG6 692 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 CCDC26Q8TAB7 109 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
SCN9A-201ENST00000303354 HNRNPDLO14979 420 aaKnown RBP8.57□□□□□ -1.04
SCN9A-201ENST00000303354 PLCB4Q15147 1175 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 RAPH1Q70E73 1250 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 THNSL1Q8IYQ7 743 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 ACRBPQ8NEB7 543 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 CARD6Q9BX69 1037 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 CBX8Q9HC52 389 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 DDIT3P35638 169 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 PPP2R3AQ06190 1150 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 SLC9C1Q4G0N8 1177 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 SYDE2Q5VT97 1194 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 DEFB132Q7Z7B7 95 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 ANKRD36BP1Q96IX9 119 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 NSRP1Q9H0G5 558 aaKnown RBP8.57□□□□□ -1.04
SCN9A-201ENST00000303354 RAB20Q9NX57 234 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 METP08581 1390 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 RALGAPBQ86X10 1494 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 PDE8BO95263 885 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 UBL4BQ8N7F7 174 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 MASTLQ96GX5 879 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 RABGAP1Q9Y3P9 1069 aa8.57□□□□□ -1.04
SCN9A-201ENST00000303354 NUP153P49790 1475 aaKnown RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 NMT2O60551 498 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 CCDC84Q86UT8 332 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 PIGOQ8TEQ8 1089 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 EXT2Q93063 718 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 BFSP1Q12934 665 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 PDXDC2PQ6P474 469 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 SEPT6Q14141 434 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 MYOCDQ8IZQ8 938 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 SECISBP2LQ93073 1101 aaKnown RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 CTSHP09668 335 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 PTGDRQ13258 359 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 ADAM9Q13443 819 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 MESDQ14696 234 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 RPUSD2Q8IZ73 545 aaKnown RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 ARHGEF1Q92888 912 aaKnown RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 DESI2Q9BSY9 194 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 TMEM106CQ9BVX2 250 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 TPCN1Q9ULQ1 816 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 IBTKQ9P2D0 1353 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 KCNK3O14649 394 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 TTLL1O95922 423 aa8.56□□□□□ -1.04
SCN9A-201ENST00000303354 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
SCN9A-201ENST00000303354 GSTA1P08263 222 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms