RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 EZH2Q15910 746 aaKnown RBP15.65■□□□□ 0.1
SDC2-201ENST00000302190 TUBE1Q9UJT0 475 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 GNA11P29992 359 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 PRCPP42785 496 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 TCP10Q12799 353 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 NONOQ15233 471 aaKnown RBP eCLIP15.65■□□□□ 0.1
SDC2-201ENST00000302190 KCTD16Q68DU8 428 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 PARP3Q9Y6F1 533 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 BTAF1O14981 1849 aa15.65■□□□□ 0.1
SDC2-201ENST00000302190 ATP1A2P50993 1020 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 GUCY2FP51841 1108 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 SGMS1Q86VZ5 419 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 NKX2-3Q8TAU0 364 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 BPIFA3Q9BQP9 254 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 BICDL2A1A5D9 508 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 FGFR1OPO95684 399 aaKnown RBP15.64■□□□□ 0.09
SDC2-201ENST00000302190 CHRM1P11229 460 aaPredicted RBP15.64■□□□□ 0.09
SDC2-201ENST00000302190 CYP2C19P33261 490 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 HERC4Q5GLZ8 1057 aaPredicted RBP15.64■□□□□ 0.09
SDC2-201ENST00000302190 STAG2Q8N3U4 1231 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 ADAM21Q9UKJ8 722 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 CTDP1Q9Y5B0 961 aaPredicted RBP15.64■□□□□ 0.09
SDC2-201ENST00000302190 IFFO1Q0D2I5 559 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 EARS2Q5JPH6 523 aaKnown RBP15.64■□□□□ 0.09
SDC2-201ENST00000302190 ZNF34Q8IZ26 560 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 MYCBPQ99417 103 aaPredicted RBP15.64■□□□□ 0.09
SDC2-201ENST00000302190 PKD2L1Q9P0L9 805 aa15.64■□□□□ 0.09
SDC2-201ENST00000302190 HSF2BPO75031 334 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 MCM3P25205 808 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 REXO1L1PQ8IX06 675 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 STAG1Q8WVM7 1258 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 EYA3Q99504 573 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 FAM204AQ9H8W3 233 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 GEMIN8Q9NWZ8 242 aaKnown RBP15.63■□□□□ 0.09
SDC2-201ENST00000302190 TAF1P21675 1872 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 C2orf54Q08AI8 447 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 KRT26Q7Z3Y9 468 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 AFAP1L1Q8TED9 768 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 SMCR8Q8TEV9 937 aaPredicted RBP15.63■□□□□ 0.09
SDC2-201ENST00000302190 COA7Q96BR5 231 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 CNOT6LQ96LI5 555 aaKnown RBP15.63■□□□□ 0.09
SDC2-201ENST00000302190 TTC26A0AVF1 554 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 TRIM66O15016 1216 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 RPS6KA4O75676 772 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 NDUFA10O95299 355 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 CD44P16070 742 aaKnown RBP15.63■□□□□ 0.09
SDC2-201ENST00000302190 FCHSD1Q86WN1 690 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 REXO1Q8N1G1 1221 aaKnown RBP15.63■□□□□ 0.09
SDC2-201ENST00000302190 SRBD1Q8N5C6 995 aaKnown RBP15.63■□□□□ 0.09
SDC2-201ENST00000302190 NAA15Q9BXJ9 866 aaKnown RBP15.63■□□□□ 0.09
SDC2-201ENST00000302190 AGXT2Q9BYV1 514 aa15.63■□□□□ 0.09
SDC2-201ENST00000302190 CSF1RP07333 972 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 BRD3Q15059 726 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 MAEAQ7L5Y9 396 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 FBXO41Q8TF61 875 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 IL17RAQ96F46 866 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 TLDC2A0PJX2 215 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 GOLGA6BA6NDN3 693 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 CHMP2AO43633 222 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 BANK1Q8NDB2 785 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 GOLGA6CA6NDK9 693 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 GOLGA6DP0CG33 693 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 SSR1P43307 286 aaKnown RBP15.62■□□□□ 0.09
SDC2-201ENST00000302190 CALCRLQ16602 461 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 C8orf74Q6P047 294 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 FAM76AQ8TAV0 307 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 RIN2Q8WYP3 895 aaPredicted RBP15.62■□□□□ 0.09
SDC2-201ENST00000302190 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.62■□□□□ 0.09
SDC2-201ENST00000302190 GOLGA6AQ9NYA3 693 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 PAPPAQ13219 1627 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 RFX7Q2KHR2 1363 aa15.62■□□□□ 0.09
SDC2-201ENST00000302190 H7C1D1 291 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 PLCG1P19174 1290 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 BMP6P22004 513 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 SLC16A2P36021 539 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 TCP11X2Q5H9J9 407 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 ICE2Q659A1 982 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 ADAT2Q7Z6V5 191 aaKnown RBP15.61■□□□□ 0.09
SDC2-201ENST00000302190 TJP1Q07157 1748 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 LAMB4A4D0S4 1761 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 CCDC151A5D8V7 595 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 CASP8Q14790 479 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 TMEM110-MUSTN1A8MSY1 372 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 MYO1CO00159 1063 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 PRPF3O43395 683 aaKnown RBP15.61■□□□□ 0.09
SDC2-201ENST00000302190 SCNN1DP51172 638 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 VSNL1P62760 191 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 RASSF7Q02833 373 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 LLGL1Q15334 1064 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 NTRK3Q16288 839 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 USH1GQ495M9 461 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 TMTC3Q6ZXV5 915 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 ZNF804AQ7Z570 1209 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 MAP3K14Q99558 947 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 YY1AP1Q9H869 796 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 ABHD10Q9NUJ1 306 aa15.61■□□□□ 0.09
SDC2-201ENST00000302190 N4BP1O75113 896 aaKnown RBP15.6■□□□□ 0.09
SDC2-201ENST00000302190 EVX2Q03828 476 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 NFIXQ14938 502 aa15.6■□□□□ 0.09
SDC2-201ENST00000302190 PPP2R5BQ15173 497 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms