RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 KIAA1468Q9P260 1216 aa17.86■□□□□ 0.45
HERPUD1-201ENST00000300302 WDR46O15213 610 aaKnown RBP17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 POLR2DO15514 142 aaKnown RBP17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 NEMFO60524 1076 aa17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 USP14P54578 494 aa17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 STX1AQ16623 288 aa17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 PRAMEF18Q5VWM3 479 aa17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 KANK3Q6NY19 840 aa17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 DTHD1Q6ZMT9 781 aa17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 KRBA2Q6ZNG9 492 aa17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 TEX2Q8IWB9 1127 aa17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 KIFC2Q96AC6 838 aa17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 PYM1Q9BRP8 204 aaKnown RBP17.85■□□□□ 0.45
HERPUD1-201ENST00000300302 ZC3H4Q9UPT8 1303 aaKnown RBP17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 GLTPD2A6NH11 291 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 SNAP25P60880 206 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 UBE2SQ16763 222 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 USH1GQ495M9 461 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 SYMPKQ92797 1274 aaKnown RBP17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 NAP1L4Q99733 375 aaKnown RBP17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 TXLNAP40222 546 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 AP3B2Q13367 1082 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 LONRF3Q496Y0 759 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 ANO6Q4KMQ2 910 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 SULF1Q8IWU6 871 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 FAM200AQ8TCP9 573 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 L3MBTL3Q96JM7 780 aaPredicted RBP17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 WDR18Q9BV38 432 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 RANBP17Q9H2T7 1088 aaKnown RBP17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 ANO10Q9NW15 660 aa17.84■□□□□ 0.45
HERPUD1-201ENST00000300302 OR52Z1P0C646 297 aa17.83■□□□□ 0.44
HERPUD1-201ENST00000300302 KLRG1Q96E93 195 aa17.83■□□□□ 0.44
HERPUD1-201ENST00000300302 EPSTI1Q96J88 318 aa17.83■□□□□ 0.44
HERPUD1-201ENST00000300302 USP25Q9UHP3 1055 aa17.83■□□□□ 0.44
HERPUD1-201ENST00000300302 PTPRAP18433 802 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP49Q70CQ1 688 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 ZKSCAN4Q969J2 545 aaPredicted RBP17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 TMEM60Q9H2L4 133 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP17L15C9J2P7 530 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP17L13C9JLJ4 530 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP17L11C9JVI0 530 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP17L18D6R9N7 530 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP17L22D6RA61 530 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP17L17D6RBQ6 530 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP17L19D6RCP7 530 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP17L20D6RJB6 530 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 FOSP01100 380 aaPredicted RBP17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP17L24Q0WX57 530 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 MTMR2Q13614 643 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 IL17AQ16552 155 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 PPP4R3AQ6IN85 833 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP17L6PQ6QN14 398 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 USP50Q70EL3 339 aaPredicted RBP17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 PDILTQ8N807 584 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 PRPF38AQ8NAV1 312 aaKnown RBP17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 ZNF280CQ8ND82 737 aa17.82■□□□□ 0.44
HERPUD1-201ENST00000300302 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 MEIS2O14770 477 aa17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 GCFC2P16383 781 aaKnown RBP17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 EPHX2P34913 555 aa17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 CCDC173Q0VFZ6 552 aa17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 SPP2Q13103 211 aa17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 NOL9Q5SY16 702 aaKnown RBP17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 CCDC174Q6PII3 467 aa17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 CEP57L1Q8IYX8 460 aa17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 AK8Q96MA6 479 aa17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 NAT10Q9H0A0 1025 aaKnown RBP17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 SERTAD1Q9UHV2 236 aa17.81■□□□□ 0.44
HERPUD1-201ENST00000300302 SSC5DA1L4H1 1573 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 ZNF165P49910 485 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 BACE1P56817 501 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 DLK2Q6UY11 383 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 ERCC4Q92889 916 aaPredicted RBP17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 DHX58Q96C10 678 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 ANO3Q9BYT9 981 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 TANGO6Q9C0B7 1094 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 DNAJC25Q9H1X3 360 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 MRPL11Q9Y3B7 192 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 SPDYE3A6NKU9 549 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 POTECB2RU33 542 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 PIK3CDO00329 1044 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 ACTN4O43707 911 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 SLFN14P0C7P3 912 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 USP11P51784 963 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 POSTNQ15063 836 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 CALCRLQ16602 461 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 IQUBQ8NA54 791 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 ZC3H15Q8WU90 426 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 FBXO28Q9NVF7 368 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 TUBE1Q9UJT0 475 aa17.8■□□□□ 0.44
HERPUD1-201ENST00000300302 POLR2AP24928 1970 aaKnown RBP17.79■□□□□ 0.44
HERPUD1-201ENST00000300302 ABCB11O95342 1321 aa17.79■□□□□ 0.44
HERPUD1-201ENST00000300302 C19orf81C9J6K1 198 aa17.79■□□□□ 0.44
HERPUD1-201ENST00000300302 VCAM1P19320 739 aa17.79■□□□□ 0.44
HERPUD1-201ENST00000300302 PNOCQ13519 176 aa17.79■□□□□ 0.44
HERPUD1-201ENST00000300302 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.441e-12■■■□□ 16.3
HERPUD1-201ENST00000300302 EMILIN3Q9NT22 766 aa17.79■□□□□ 0.44
HERPUD1-201ENST00000300302 ZHX2Q9Y6X8 837 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms