RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TSGA10Q9BZW7 698 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 GREM2Q9H772 168 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 TNKSO95271 1327 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 ARHGAP23Q9P227 1491 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 DDX60Q8IY21 1712 aaKnown RBP14.48□□□□□ -0.09
TVP23A-201ENST00000299866 PSMA7O14818 248 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 PDHBP11177 359 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 LCORLQ8N3X6 602 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 CAVIN3Q969G5 261 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 A1CFQ9NQ94 594 aaKnown RBP14.48□□□□□ -0.09
TVP23A-201ENST00000299866 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.48□□□□□ -0.09
TVP23A-201ENST00000299866 FRMD3A2A2Y4 597 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 BACH1O14867 736 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 AKR1B10O60218 316 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 TCP1P17987 556 aaKnown RBP14.48□□□□□ -0.09
TVP23A-201ENST00000299866 CCDC121Q6ZUS5 278 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 IFT20Q8IY31 132 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 NACAP1Q9BZK3 213 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 SH2D4AQ9H788 454 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 MCM8Q9UJA3 840 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 SLIT3O75094 1523 aa14.48□□□□□ -0.09
TVP23A-201ENST00000299866 PP2D1A8MPX8 630 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 HEXIM1O94992 359 aaKnown RBP14.47□□□□□ -0.09
TVP23A-201ENST00000299866 E2F5Q15329 346 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 STAG1Q8WVM7 1258 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 ALS2CR12Q96Q35 445 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 NOC4LQ9BVI4 516 aaKnown RBP14.47□□□□□ -0.09
TVP23A-201ENST00000299866 TTYH3Q9C0H2 523 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 VEZTQ9HBM0 779 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 ABCC12Q96J65 1359 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 USP54Q70EL1 1684 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 NKRFO15226 690 aaKnown RBP eCLIP14.47□□□□□ -0.09
TVP23A-201ENST00000299866 EIF4A3P38919 411 aaKnown RBP14.47□□□□□ -0.09
TVP23A-201ENST00000299866 MDH1P40925 334 aaKnown RBP14.47□□□□□ -0.09
TVP23A-201ENST00000299866 SMTNP53814 917 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 NLRP5P59047 1200 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 MAP3K12Q12852 859 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 TRADDQ15628 312 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 RPAINQ86UA6 219 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 IQCA1Q86XH1 822 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 DHX37Q8IY37 1157 aaKnown RBP14.47□□□□□ -0.09
TVP23A-201ENST00000299866 IQCKQ8N0W5 287 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 NUP58Q9BVL2 599 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 THAP9Q9H5L6 903 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 FAM207AQ9NSI2 230 aaPredicted RBP14.47□□□□□ -0.09
TVP23A-201ENST00000299866 BCL9LQ86UU0 1499 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 GOLGA6L7A0A1B0GV03 622 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 ADAMTS3O15072 1205 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 ERCC3P19447 782 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 PREPLQ4J6C6 727 aaPredicted RBP14.47□□□□□ -0.09
TVP23A-201ENST00000299866 CNOT6LQ96LI5 555 aaKnown RBP14.47□□□□□ -0.09
TVP23A-201ENST00000299866 FBXO3Q9UK99 471 aa14.47□□□□□ -0.09
TVP23A-201ENST00000299866 BAZ2BQ9UIF8 2168 aaKnown RBP14.46□□□□□ -0.09
TVP23A-201ENST00000299866 KIF11P52732 1056 aa14.46□□□□□ -0.09
TVP23A-201ENST00000299866 ATXN2Q99700 1313 aaKnown RBP14.46□□□□□ -0.09
TVP23A-201ENST00000299866 KIRREL3Q8IZU9 778 aa14.46□□□□□ -0.1
TVP23A-201ENST00000299866 ISCA1Q9BUE6 129 aa14.46□□□□□ -0.1
TVP23A-201ENST00000299866 BCCIPQ9P287 314 aaKnown RBP eCLIP14.46□□□□□ -0.1
TVP23A-201ENST00000299866 ARHGAP20Q9P2F6 1191 aa14.46□□□□□ -0.1
TVP23A-201ENST00000299866 SALL4Q9UJQ4 1053 aa14.46□□□□□ -0.1
TVP23A-201ENST00000299866 SPATA31A3Q5VYP0 1347 aa14.46□□□□□ -0.1
TVP23A-201ENST00000299866 RASSF9O75901 435 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 MAGEA1P43355 309 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 CHRNA2Q15822 529 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 KCTD19Q17RG1 926 aaPredicted RBP14.45□□□□□ -0.1
TVP23A-201ENST00000299866 TMC4Q7Z404 712 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 ATP6V1G3Q96LB4 118 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 MEGF6O75095 1541 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 PRPF3O43395 683 aaKnown RBP14.45□□□□□ -0.1
TVP23A-201ENST00000299866 PCCAP05165 728 aaPredicted RBP14.45□□□□□ -0.1
TVP23A-201ENST00000299866 MYH10P35580 1976 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 RASSF7Q02833 373 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 ITIH3Q06033 890 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 PAK2Q13177 524 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 TTI2Q6NXR4 508 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 SPATA5Q8NB90 893 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 SDR42E1Q8WUS8 393 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 KRT12Q99456 494 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 DUSP9Q99956 384 aaKnown RBP14.45□□□□□ -0.1
TVP23A-201ENST00000299866 MMRN2Q9H8L6 949 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 HAUS2Q9NVX0 235 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 RIC1Q4ADV7 1423 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 FAM107AO95990 144 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 VEGFAP15692 232 aaPredicted RBP14.45□□□□□ -0.1
TVP23A-201ENST00000299866 PPP2R5AQ15172 486 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 SNCBQ16143 134 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 KRT28Q7Z3Y7 464 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 YTHDF3Q7Z739 585 aaKnown RBP14.45□□□□□ -0.1
TVP23A-201ENST00000299866 CATIPQ7Z7H3 387 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 PIK3R5Q8WYR1 880 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 MIEF2Q96C03 454 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 CYFIP2Q96F07 1278 aa14.45□□□□□ -0.1
TVP23A-201ENST00000299866 ATRNO75882 1429 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 SOS2Q07890 1332 aaPredicted RBP14.44□□□□□ -0.1
TVP23A-201ENST00000299866 ANKRD18BA2A2Z9 1011 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 NPY5RQ15761 445 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 SPRED3Q2MJR0 410 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 IFIT1BQ5T764 474 aaKnown RBP14.44□□□□□ -0.1
TVP23A-201ENST00000299866 OR2W6PQ8NHA6 318 aa14.44□□□□□ -0.1
TVP23A-201ENST00000299866 RUBCNQ92622 972 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms