RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ARFGAP3Q9NP61 516 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 PRDM10Q9NQV6 1147 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GGA1Q9UJY5 639 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MYH8P13535 1937 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 LTBP1Q14766 1721 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CCT6AP40227 531 aaKnown RBP11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 BTDP43251 543 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CDK8P49336 464 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CHMP4BP1P59074 171 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 KRT83P78385 493 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CDK17Q00537 523 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 UBXN1Q04323 297 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 INF2Q27J81 1249 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ASPRV1Q53RT3 343 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ZNF772Q68DY9 489 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CNNM4Q6P4Q7 775 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CABP7Q86V35 215 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TEX11Q8IYF3 940 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 LRRN4CLQ8ND94 238 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NAP1L4Q99733 375 aaKnown RBP11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GBP3Q9H0R5 595 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TAB2Q9NYJ8 693 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CAPN11Q9UMQ6 739 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 LUC7L2Q9Y383 392 aaKnown RBP11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 FLT1P17948 1338 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CYTH3O43739 400 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ERLIN1O75477 346 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 FGFR1OPO95684 399 aaKnown RBP11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CCNE1P24864 410 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 KRT9P35527 623 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 EVX2Q03828 476 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NFIXQ14938 502 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TEX35Q5T0J7 233 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TTI2Q6NXR4 508 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CC2D1AQ6P1N0 951 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CCDC170Q8IYT3 715 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ZNF507Q8TCN5 953 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 DYNLL2Q96FJ2 89 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CALML4Q96GE6 196 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TRIM47Q96LD4 638 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 HAUS4Q9H6D7 363 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CD209Q9NNX6 404 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 EXOC1Q9NV70 894 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ZNHIT6Q9NWK9 470 aaKnown RBP11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 STX8Q9UNK0 236 aa11.23□□□□□ -0.61
TNFRSF11B-201ENST00000297350 A0A1W2PQJ5 194 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 USP17L3A6NCW0 530 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 USP17L4A6NCW7 530 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SRGNP10124 158 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 HOXA10P31260 410 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MTF1Q14872 753 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MEA1Q16626 185 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TMEM266Q2M3C6 531 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ARHGAP27Q6ZUM4 889 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 USP17L1Q7RTZ2 530 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 REXO1Q8N1G1 1221 aaKnown RBP11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MSANTD4Q8NCY6 345 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CPLX3Q8WVH0 158 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 VPS16Q9H269 839 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 LZTFL1Q9NQ48 299 aa11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 BAZ2BQ9UIF8 2168 aaKnown RBP11.22□□□□□ -0.61
TNFRSF11B-201ENST00000297350 PVALEFA0A1B0GWK0 134 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MCM3P25205 808 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 PTPN21Q16825 1174 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 KIF4BQ2VIQ3 1234 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 IRF2BP1Q8IU81 584 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 STAMQ92783 540 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 P2RX5Q93086 422 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RPGRIP1Q96KN7 1286 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 UBXN6Q9BZV1 441 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TRIM9Q9C026 710 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GLT8D2Q9H1C3 349 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TMEM60Q9H2L4 133 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RIOX1Q9H6W3 641 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RAB21Q9UL25 225 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GDAQ9Y2T3 454 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SMCO2A6NFE2 343 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 UFL1O94874 794 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NDUFA10O95299 355 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 IPO7O95373 1038 aaKnown RBP11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 VEGFAP15692 232 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CYLC1P35663 651 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ERVK-24P63145 666 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GPS2Q13227 327 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 PDIA5Q14554 519 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SEPT2Q15019 361 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SLC35G1Q2M3R5 365 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ZNF569Q5MCW4 686 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MAPKAPK5Q8IW41 473 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CRAMP1Q96RY5 1269 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SWAP70Q9UH65 585 aa11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 EPN1Q9Y6I3 576 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ANKRD31Q8N7Z5 1873 aa11.21□□□□□ -0.62
TNFRSF11B-201ENST00000297350 PSMD14O00487 310 aa11.2□□□□□ -0.62
TNFRSF11B-201ENST00000297350 PLCG1P19174 1290 aa11.2□□□□□ -0.62
TNFRSF11B-201ENST00000297350 GPSM2P81274 684 aa11.2□□□□□ -0.62
TNFRSF11B-201ENST00000297350 ZBED6P86452 979 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms