RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 TRIM66O15016 1216 aa17.2■□□□□ 0.34
CAPN2-201ENST00000295006 UFL1O94874 794 aa17.2■□□□□ 0.34
CAPN2-201ENST00000295006 GNA11P29992 359 aa17.2■□□□□ 0.34
CAPN2-201ENST00000295006 CKAP4Q07065 602 aaKnown RBP17.2■□□□□ 0.34
CAPN2-201ENST00000295006 STK4Q13043 487 aa17.2■□□□□ 0.34
CAPN2-201ENST00000295006 KCTD19Q17RG1 926 aaPredicted RBP17.2■□□□□ 0.34
CAPN2-201ENST00000295006 KRT79Q5XKE5 535 aa17.2■□□□□ 0.34
CAPN2-201ENST00000295006 ALS2CR12Q96Q35 445 aa17.2■□□□□ 0.34
CAPN2-201ENST00000295006 TSG101Q99816 390 aa17.2■□□□□ 0.34
CAPN2-201ENST00000295006 ZNF287Q9HBT7 754 aa17.2■□□□□ 0.34
CAPN2-201ENST00000295006 BCCIPQ9P287 314 aaKnown RBP eCLIP17.2■□□□□ 0.34
CAPN2-201ENST00000295006 FAM237AA0A1B0GTK4 181 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 MOCS3O95396 460 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 MLXIPQ9HAP2 919 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 TMCO5BA8MYB1 307 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 LDHCP07864 332 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 PLEKP08567 350 aaPredicted RBP17.19■□□□□ 0.34
CAPN2-201ENST00000295006 RAPGEF1Q13905 1077 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 IQCEQ6IPM2 695 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 PLCD3Q8N3E9 789 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 EHBP1Q8NDI1 1231 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 CHD2O14647 1828 aaKnown RBP17.19■□□□□ 0.34
CAPN2-201ENST00000295006 POTEMA6NI47 508 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 IRX5P78411 483 aaPredicted RBP17.19■□□□□ 0.34
CAPN2-201ENST00000295006 IL17AQ16552 155 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 CALCRLQ16602 461 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 RSRC2Q7L4I2 434 aaKnown RBP17.19■□□□□ 0.34
CAPN2-201ENST00000295006 REXO1Q8N1G1 1221 aaKnown RBP17.19■□□□□ 0.34
CAPN2-201ENST00000295006 P2RX5Q93086 422 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 TMEM47Q9BQJ4 181 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 ANKZF1Q9H8Y5 726 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 KCND1Q9NSA2 647 aa17.19■□□□□ 0.34
CAPN2-201ENST00000295006 SLC16A2P36021 539 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 RASSF7Q02833 373 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 SF3A3Q12874 501 aaKnown RBP eCLIP17.18■□□□□ 0.34
CAPN2-201ENST00000295006 NT5DC1Q5TFE4 455 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 CDKAL1Q5VV42 579 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 ANKRD40Q6AI12 368 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 ANKRD2Q9GZV1 360 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 RTCBQ9Y3I0 505 aaKnown RBP17.18■□□□□ 0.34
CAPN2-201ENST00000295006 H0YHG0 523 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 RNF40O75150 1001 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 AFAP1L1Q8TED9 768 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 MTRQ99707 1265 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 LACRTQ9GZZ8 138 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 KCTD16Q68DU8 428 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 RAB34Q9BZG1 259 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 EHD2Q9NZN4 543 aa17.18■□□□□ 0.34
CAPN2-201ENST00000295006 NCK2O43639 380 aa17.17■□□□□ 0.34
CAPN2-201ENST00000295006 BTDP43251 543 aa17.17■□□□□ 0.34
CAPN2-201ENST00000295006 NEK8Q86SG6 692 aa17.17■□□□□ 0.34
CAPN2-201ENST00000295006 MARCH10Q8NA82 808 aaPredicted RBP17.17■□□□□ 0.34
CAPN2-201ENST00000295006 LGALS16A8MUM7 142 aa17.17■□□□□ 0.34
CAPN2-201ENST00000295006 TRAPPC10P48553 1259 aa17.17■□□□□ 0.34
CAPN2-201ENST00000295006 TMC4Q7Z404 712 aa17.17■□□□□ 0.34
CAPN2-201ENST00000295006 ARFGEF2Q9Y6D5 1785 aa17.17■□□□□ 0.34
CAPN2-201ENST00000295006 UBE2SQ16763 222 aa17.17■□□□□ 0.34
CAPN2-201ENST00000295006 CNNM4Q6P4Q7 775 aa17.17■□□□□ 0.34
CAPN2-201ENST00000295006 CCDC155Q8N6L0 562 aa17.17■□□□□ 0.34
CAPN2-201ENST00000295006 LIMA1Q9UHB6 759 aaKnown RBP17.17■□□□□ 0.34
CAPN2-201ENST00000295006 MARF1Q9Y4F3 1742 aaKnown RBP17.16■□□□□ 0.34
CAPN2-201ENST00000295006 GUCY2FP51841 1108 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 PCDHA6Q9UN73 950 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 PCDHA8Q9Y5H6 950 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 GOLGA6BA6NDN3 693 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 ATP8B1O43520 1251 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 EIF4A3P38919 411 aaKnown RBP17.16■□□□□ 0.34
CAPN2-201ENST00000295006 ATP1A2P50993 1020 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 MFSD14BQ5SR56 506 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 BEND6Q5SZJ8 279 aaPredicted RBP17.16■□□□□ 0.34
CAPN2-201ENST00000295006 PDXDC2PQ6P474 469 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 MAATS1Q7Z4T9 603 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 POTEDQ86YR6 584 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 ADSSL1Q8N142 457 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 TSPYL1Q9H0U9 437 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 CCNL1Q9UK58 526 aaPredicted RBP17.16■□□□□ 0.34
CAPN2-201ENST00000295006 CRYBG1Q9Y4K1 1723 aa17.16■□□□□ 0.34
CAPN2-201ENST00000295006 ACTN2P35609 894 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 PRPF4BQ13523 1007 aaKnown RBP17.15■□□□□ 0.34
CAPN2-201ENST00000295006 ODF2Q5BJF6 829 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 KLHL7Q8IXQ5 586 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 TAF4BQ92750 862 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 SPAG5Q96R06 1193 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 RASSF4Q9H2L5 321 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 HERC4Q5GLZ8 1057 aaPredicted RBP17.15■□□□□ 0.34
CAPN2-201ENST00000295006 ZNF804AQ7Z570 1209 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 NYXQ9GZU5 481 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 TMX4Q9H1E5 349 aaPredicted RBP17.15■□□□□ 0.34
CAPN2-201ENST00000295006 GOLGA6CA6NDK9 693 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 GOLGA6DP0CG33 693 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 MCM3P25205 808 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 KRT25Q7Z3Z0 450 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 GOLGA6AQ9NYA3 693 aa17.15■□□□□ 0.34
CAPN2-201ENST00000295006 EEF1GP26641 437 aaKnown RBP17.14■□□□□ 0.33
CAPN2-201ENST00000295006 DCAF17Q5H9S7 520 aaPredicted RBP17.14■□□□□ 0.33
CAPN2-201ENST00000295006 WDR66Q8TBY9 1149 aa17.14■□□□□ 0.33
CAPN2-201ENST00000295006 LAMA4Q16363 1823 aa17.14■□□□□ 0.33
CAPN2-201ENST00000295006 LRRIQ3A6PVS8 624 aaPredicted RBP17.14■□□□□ 0.33
CAPN2-201ENST00000295006 CCNE1P24864 410 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms