RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 CNOT6LQ96LI5 555 aaKnown RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 RNF41Q9H4P4 317 aaPredicted RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 KLC4Q9NSK0 619 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 MTMR7Q9Y216 660 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 RIPOR2Q9Y4F9 1068 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 PCDHA13Q9Y5I0 950 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 A0A1W2PQC6 194 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 TCRBV5S4A2TA0A5A2 114 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 GOLGA6L10A6NI86 522 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 UQCRFS1P1P0C7P4 283 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 EIF4A3P38919 411 aaKnown RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 MAGEA1P43355 309 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 FNTAP49354 379 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 SKOR1P84550 965 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 E2F5Q15329 346 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 ALX1Q15699 326 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 IFT20Q8IY31 132 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 CCDC170Q8IYT3 715 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 ESR2Q92731 530 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 ZKSCAN4Q969J2 545 aaPredicted RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 CCT8L2Q96SF2 557 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 EPN3Q9H201 632 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 PDS5AQ29RF7 1337 aaKnown RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 ZNF263O14978 683 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 CHRM1P11229 460 aaPredicted RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 TCP1P17987 556 aaKnown RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 UBA7P41226 1012 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 NEDD9Q14511 834 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 KCTD19Q17RG1 926 aaPredicted RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 TDRD12Q587J7 1177 aaKnown RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 ODF2Q5BJF6 829 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 NLRP14Q86W24 1093 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 ZNF507Q8TCN5 953 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 RASGRP4Q8TDF6 673 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 STAG1Q8WVM7 1258 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 NUP58Q9BVL2 599 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 ABCF2Q9UG63 623 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 ODF2LQ9ULJ1 636 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 MEGF6O75095 1541 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 CYP2D7A0A087X1C5 515 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 PPP1R37O75864 691 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 SRGNP10124 158 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 KIF11P52732 1056 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 IL17AQ16552 155 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 TMC4Q7Z404 712 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 CCDC13Q8IYE1 715 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 RTL9Q8NET4 1388 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 FSBPO95073 299 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 PDE8BO95263 885 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 RASSF7Q02833 373 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 MEA1Q16626 185 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 PTGISQ16647 500 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 KRT12Q99456 494 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
LMX1A-201ENST00000294816 ABCC12Q96J65 1359 aa11.4□□□□□ -0.59
LMX1A-201ENST00000294816 ZNF233A6NK53 670 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 GLI1P08151 1106 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 MMP14P50281 582 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 PAK2Q13177 524 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 RASGRF1Q13972 1273 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 RRAGAQ7L523 313 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 KLHL7Q8IXQ5 586 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 MYCBPAPQ8TBZ2 947 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 DDX17Q92841 729 aaKnown RBP11.39□□□□□ -0.59
LMX1A-201ENST00000294816 PYM1Q9BRP8 204 aaKnown RBP11.39□□□□□ -0.59
LMX1A-201ENST00000294816 ISCA1Q9BUE6 129 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 THAP9Q9H5L6 903 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 ECM29Q5VYK3 1845 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 SPEF2Q9C093 1822 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 ARHGAP23Q9P227 1491 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 A6NNZ2 444 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 PDE4DQ08499 809 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 TUBB8Q3ZCM7 444 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 SPATS2Q86XZ4 545 aaKnown RBP11.39□□□□□ -0.59
LMX1A-201ENST00000294816 SLC40A1Q9NP59 571 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 PRPF3O43395 683 aaKnown RBP11.39□□□□□ -0.59
LMX1A-201ENST00000294816 PCCAP05165 728 aaPredicted RBP11.39□□□□□ -0.59
LMX1A-201ENST00000294816 PDHBP11177 359 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 CYP7A1P22680 504 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 ELF1P32519 619 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 ASIC1P78348 528 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 PTPROQ16827 1216 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 ENAHQ8N8S7 591 aaPredicted RBP11.39□□□□□ -0.59
LMX1A-201ENST00000294816 CCDC47Q96A33 483 aaKnown RBP11.39□□□□□ -0.59
LMX1A-201ENST00000294816 TANGO6Q9C0B7 1094 aa11.39□□□□□ -0.59
LMX1A-201ENST00000294816 TRMT112Q9UI30 125 aaKnown RBP11.39□□□□□ -0.59
LMX1A-201ENST00000294816 FTCDO95954 541 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 EPB41P11171 864 aaKnown RBP11.38□□□□□ -0.59
LMX1A-201ENST00000294816 CFAP221Q4G0U5 840 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 KDM7AQ6ZMT4 941 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 CACNA2D4Q7Z3S7 1137 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 HPS3Q969F9 1004 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 VEZTQ9HBM0 779 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 RIC1Q4ADV7 1423 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 RASSF10A6NK89 507 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 CLGNO14967 610 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 ADAMTS3O15072 1205 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms