RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SAP30BPQ9UHR5 308 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 BUB1O43683 1085 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 JADE1Q6IE81 842 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 LSM14BQ9BX40 385 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 ARMT1Q9H993 441 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 MRPL44Q9H9J2 332 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 CACYBPQ9HB71 228 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 NCOA3Q9Y6Q9 1424 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 ZNF521Q96K83 1311 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 SART1O43290 800 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 CNGA1P29973 690 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 DZIP3Q86Y13 1208 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 CCDC197Q8NCU1 140 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 LRRC8CQ8TDW0 803 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 APPBP2Q92624 585 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 SDCCAG3Q96C92 435 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 DBNDD2Q9BQY9 259 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 KRT3P12035 628 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 EIF6P56537 245 aaKnown RBP11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 APBA1Q02410 837 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 ADAT2Q7Z6V5 191 aaKnown RBP11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 RDH13Q8NBN7 331 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 GLT8D2Q9H1C3 349 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 THEGQ9P2T0 379 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 KCNJ18B7U540 433 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 GPAA1O43292 621 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 KCNJ12Q14500 433 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 E2F4Q16254 413 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 SCYL3Q8IZE3 742 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 UIMC1Q96RL1 719 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 INTS9Q9NV88 658 aaKnown RBP11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 PNMA6AP0CW24 399 aaPredicted RBP11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 GUCY2DQ02846 1103 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 FBXO38Q6PIJ6 1188 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 LRRC8AQ8IWT6 810 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 EIF4A1P60842 406 aaKnown RBP11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 RBM26Q5T8P6 1007 aaKnown RBP11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 ADALQ6DHV7 355 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 TPTE2Q6XPS3 522 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 RABGGTAQ92696 567 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 ABTB1Q969K4 478 aaPredicted RBP11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 PSD3Q9NYI0 1048 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 OVOS2A0A0J9YW53 1432 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 OVOS2Q6IE36 1432 aa11.76□□□□□ -0.53
PKNOX1-201ENST00000291547 HMGB1P1B2RPK0 211 aaPredicted RBP11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 EIF3CLB5ME19 914 aaKnown RBP11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 GSTA1P08263 222 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 KRT19P08727 400 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 GSTA2P09210 222 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 GRK7Q8WTQ7 553 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 EIF3CQ99613 913 aaKnown RBP11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 EYA2O00167 538 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 EVI5O60447 810 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 DKC1O60832 514 aaKnown RBP eCLIP11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 APOEP02649 317 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 PFKFB1P16118 471 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 CALCRLQ16602 461 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 LCA5Q86VQ0 697 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 ST7Q9NRC1 585 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 PPME1Q9Y570 386 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 DNM2P50570 870 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 TNNI3KQ59H18 835 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 MRFAP1L1Q96HT8 127 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 FPGT-TNNI3KV9GXZ4 949 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 DDX39AO00148 427 aaKnown RBP11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 ADCY7P51828 1080 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 TRMT2AQ8IZ69 625 aaKnown RBP11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 FAM210AQ96ND0 272 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 SH2D4AQ9H788 454 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 DENND2AQ9ULE3 1009 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 AXIN2Q9Y2T1 843 aa11.75□□□□□ -0.53
PKNOX1-201ENST00000291547 TULP2O00295 520 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 RIMBP2O15034 1052 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 GPC4O75487 556 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 XRCC5P13010 732 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 G2E3Q7L622 706 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 FBXO41Q8TF61 875 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 ANKRD2Q9GZV1 360 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 RAB20Q9NX57 234 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 hCG_1642624A0A1W2PR95 340 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 NR1I2O75469 434 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 MMP14P50281 582 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 MMEL1Q495T6 779 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 ANKRD13CQ8N6S4 541 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 TYW1Q9NV66 732 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 ITSN1Q15811 1721 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 GNA14O95837 355 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 H2AFZP0C0S5 128 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 TNNI1P19237 187 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 POLE2P56282 527 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 RCN2Q14257 317 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 H2AFVQ71UI9 128 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 KLHL29Q96CT2 875 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 NYXQ9GZU5 481 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 IFT172Q9UG01 1749 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms