RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 EHBP1Q8NDI1 1231 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 BSDC1Q9NW68 430 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 EXOC3O60645 756 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 GAS7O60861 476 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 IFNAR1P17181 557 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 TAL1P17542 331 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 GPSM2P81274 684 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 KMT5BQ4FZB7 885 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 CAPN12Q6ZSI9 719 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 POTEDQ86YR6 584 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 U2AF1L4Q8WU68 220 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 MRFAP1L1Q96HT8 127 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 DCP1AQ9NPI6 582 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 ADGRB2O60241 1585 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 CETN3O15182 167 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 MMP10P09238 476 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 DLATP10515 647 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 FDPSP14324 419 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 SSTR3P32745 418 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 EXOSC10Q01780 885 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 RESP18Q5W5W9 173 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 SRBD1Q8N5C6 995 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 PROCA1Q8NCQ7 364 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 RNF26Q9BY78 433 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 NPHP3-ACAD11A0A0J9YXS1 232 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 AOC3Q16853 763 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 KCTD16Q68DU8 428 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 C8orf74Q6P047 294 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 SELENOOQ9BVL4 669 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 NCAPD2Q15021 1401 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 VIRMAQ69YN4 1812 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 A0A1W2PQ27 194 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 A0A1W2PQ64 194 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 A0A1W2PQD8 194 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 ERVV-1B6SEH8 477 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 ANKRD65E5RJM6 399 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 DDAH1O94760 285 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 MOCS3O95396 460 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 NCBP1Q09161 790 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 ABCB5Q2M3G0 1257 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 RABL6Q3YEC7 729 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 SND1Q7KZF4 910 aaKnown RBP eCLIP5.3□□□□□ -1.56
UBR1-201ENST00000290650 TMEM87AQ8NBN3 555 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 TDRD3Q9H7E2 651 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 ATP8A2Q9NTI2 1148 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 KCNK3O14649 394 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 TTBK2Q6IQ55 1244 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 HDXQ7Z353 690 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 GPATCH11Q8N954 259 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 MGARPQ8TDB4 240 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 LTN1O94822 1766 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 SPOPO43791 374 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 TNFAIP3P21580 790 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 ATP2B4P23634 1241 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 MCM3P25205 808 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 CHRNA5P30532 468 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 PRCPP42785 496 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 ETF1P62495 437 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 FMR1Q06787 632 aaKnown RBP eCLIP5.3□□□□□ -1.56
UBR1-201ENST00000290650 ST3GAL1Q11201 340 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 PPP1R7Q15435 360 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 UAP1Q16222 522 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 KCTD19Q17RG1 926 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 SFMBT2Q5VUG0 894 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 DAAM2Q86T65 1068 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 TICAM2Q86XR7 235 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 MICALL1Q8N3F8 863 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 OR8K1Q8NGG5 319 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 STAG1Q8WVM7 1258 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 ZNF668Q96K58 619 aaPredicted RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 TMEM47Q9BQJ4 181 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 PDE11AQ9HCR9 933 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 KCNK9Q9NPC2 374 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 HDAC6Q9UBN7 1215 aa5.3□□□□□ -1.56
UBR1-201ENST00000290650 SRPRBQ9Y5M8 271 aaKnown RBP5.3□□□□□ -1.56
UBR1-201ENST00000290650 RGPD2P0DJD1 1756 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 CEMIPQ8WUJ3 1361 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 GOLGA6L7A0A1B0GV03 622 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 POTEB2H3BUK9 544 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 GTPBP6O43824 516 aaPredicted RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 FTCDO95954 541 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 ZSCAN20P17040 1043 aaPredicted RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 EVX2Q03828 476 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 MKRN4PQ13434 485 aaPredicted RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 CTTNQ14247 550 aaKnown RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 GRIPAP1Q4V328 841 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 CCDC84Q86UT8 332 aaPredicted RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 FBXO11Q86XK2 927 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 TMTC1Q8IUR5 882 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 MYOCDQ8IZQ8 938 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 PICK1Q9NRD5 415 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 EPN1Q9Y6I3 576 aaPredicted RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 TECPR2O15040 1411 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 IFT172Q9UG01 1749 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 VGLL3A8MV65 326 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 FCER1AP12319 257 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 EHHADHQ08426 723 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 ADAM9Q13443 819 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 KRT31Q15323 416 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms