RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ANKRD35Q8N283 1001 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 PIBF1Q8WXW3 757 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 A1CFQ9NQ94 594 aaKnown RBP23.09■■□□□ 1.29
TIMP4-201ENST00000287814 PDRG1Q9NUG6 133 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 BIN2Q9UBW5 565 aaPredicted RBP23.09■■□□□ 1.29
TIMP4-201ENST00000287814 ZNF236Q9UL36 1845 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 BAZ2BQ9UIF8 2168 aaKnown RBP23.09■■□□□ 1.29
TIMP4-201ENST00000287814 CCDC85CA6NKD9 419 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 DDX11Q96FC9 970 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 NAP1L2Q9ULW6 460 aaPredicted RBP23.09■■□□□ 1.29
TIMP4-201ENST00000287814 ZBTB5O15062 677 aa23.08■■□□□ 1.29
TIMP4-201ENST00000287814 CDC27P30260 824 aa23.08■■□□□ 1.29
TIMP4-201ENST00000287814 EVCP57679 992 aa23.08■■□□□ 1.29
TIMP4-201ENST00000287814 TMTC3Q6ZXV5 915 aa23.08■■□□□ 1.29
TIMP4-201ENST00000287814 FBXO11Q86XK2 927 aa23.08■■□□□ 1.29
TIMP4-201ENST00000287814 CCDC82Q8N4S0 544 aa23.08■■□□□ 1.29
TIMP4-201ENST00000287814 SPZ1Q9BXG8 430 aa23.08■■□□□ 1.29
TIMP4-201ENST00000287814 HMGCRP04035 888 aa23.07■■□□□ 1.28
TIMP4-201ENST00000287814 GNAQP50148 359 aa23.07■■□□□ 1.28
TIMP4-201ENST00000287814 MAML3Q96JK9 1138 aa23.07■■□□□ 1.28
TIMP4-201ENST00000287814 LZTS2Q9BRK4 669 aa23.07■■□□□ 1.28
TIMP4-201ENST00000287814 ZNFX1Q9P2E3 1918 aaKnown RBP23.07■■□□□ 1.28
TIMP4-201ENST00000287814 GOLGA8AA7E2F4 631 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 GOLGA8BA8MQT2 603 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 SMARCA1P28370 1054 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 CNTN2Q02246 1040 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 RTN1Q16799 776 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 FGD4Q96M96 766 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 KIF2CQ99661 725 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 CYP39A1Q9NYL5 469 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 PNMA2Q9UL42 364 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 PDIA3P30101 505 aaKnown RBP23.06■■□□□ 1.28
TIMP4-201ENST00000287814 ADD1P35611 737 aaKnown RBP23.06■■□□□ 1.28
TIMP4-201ENST00000287814 FUT2Q10981 343 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 NSMFQ6X4W1 530 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 TBC1D5Q92609 795 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 PURBQ96QR8 312 aaKnown RBP23.06■■□□□ 1.28
TIMP4-201ENST00000287814 AMNQ9BXJ7 453 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 C22orf23Q9BZE7 217 aa23.06■■□□□ 1.28
TIMP4-201ENST00000287814 PNMA6FA0A0J9YX94 578 aa23.05■■□□□ 1.28
TIMP4-201ENST00000287814 hCG_1642624A0A1W2PR95 340 aa23.05■■□□□ 1.28
TIMP4-201ENST00000287814 CYP2C19P33261 490 aa23.05■■□□□ 1.28
TIMP4-201ENST00000287814 RCAN1P53805 252 aa23.05■■□□□ 1.28
TIMP4-201ENST00000287814 CACNB2Q08289 660 aaPredicted RBP23.05■■□□□ 1.28
TIMP4-201ENST00000287814 TRMT44Q8IYL2 757 aaKnown RBP23.05■■□□□ 1.28
TIMP4-201ENST00000287814 UNC93B1Q9H1C4 597 aa23.05■■□□□ 1.28
TIMP4-201ENST00000287814 RBM28Q9NW13 759 aaKnown RBP23.05■■□□□ 1.28
TIMP4-201ENST00000287814 SLC5A4Q9NY91 659 aa23.05■■□□□ 1.28
TIMP4-201ENST00000287814 DIS3Q9Y2L1 958 aaKnown RBP23.05■■□□□ 1.28
TIMP4-201ENST00000287814 METAP2P50579 478 aaKnown RBP eCLIP23.04■■□□□ 1.28
TIMP4-201ENST00000287814 UBXN2AP68543 259 aa23.04■■□□□ 1.28
TIMP4-201ENST00000287814 BAATQ14032 418 aaPredicted RBP23.04■■□□□ 1.28
TIMP4-201ENST00000287814 MAP3K21Q5TCX8 1036 aa23.04■■□□□ 1.28
TIMP4-201ENST00000287814 OLFML2BQ68BL8 750 aa23.04■■□□□ 1.28
TIMP4-201ENST00000287814 FAM133AQ8N9E0 248 aa23.04■■□□□ 1.28
TIMP4-201ENST00000287814 ABCB11O95342 1321 aa23.04■■□□□ 1.28
TIMP4-201ENST00000287814 OPLAHO14841 1288 aa23.03■■□□□ 1.28
TIMP4-201ENST00000287814 CCL5P13501 91 aa23.03■■□□□ 1.28
TIMP4-201ENST00000287814 RBM25P49756 843 aaKnown RBP23.03■■□□□ 1.28
TIMP4-201ENST00000287814 ALDH8A1Q9H2A2 487 aaPredicted RBP23.03■■□□□ 1.28
TIMP4-201ENST00000287814 PCDHA1Q9Y5I3 950 aa23.03■■□□□ 1.28
TIMP4-201ENST00000287814 ASTN1O14525 1302 aa23.03■■□□□ 1.28
TIMP4-201ENST00000287814 PFASO15067 1338 aa23.03■■□□□ 1.28
TIMP4-201ENST00000287814 SOWAHBA6NEL2 793 aa23.03■■□□□ 1.28
TIMP4-201ENST00000287814 POTEB2H3BUK9 544 aa23.03■■□□□ 1.28
TIMP4-201ENST00000287814 PRKAR2AP13861 404 aaKnown RBP23.03■■□□□ 1.28
TIMP4-201ENST00000287814 SLC30A10Q6XR72 485 aa23.03■■□□□ 1.28
TIMP4-201ENST00000287814 RRP36Q96EU6 259 aaKnown RBP23.03■■□□□ 1.28
TIMP4-201ENST00000287814 NID2Q14112 1375 aa23.02■■□□□ 1.28
TIMP4-201ENST00000287814 CNTNAP5Q8WYK1 1306 aa23.02■■□□□ 1.28
TIMP4-201ENST00000287814 CAPN15O75808 1086 aa23.02■■□□□ 1.28
TIMP4-201ENST00000287814 NEK4P51957 841 aa23.02■■□□□ 1.28
TIMP4-201ENST00000287814 AK2P54819 239 aa23.02■■□□□ 1.28
TIMP4-201ENST00000287814 CCT2P78371 535 aaKnown RBP23.02■■□□□ 1.28
TIMP4-201ENST00000287814 BACH2Q9BYV9 841 aa23.02■■□□□ 1.28
TIMP4-201ENST00000287814 NCOA5Q9HCD5 579 aaKnown RBP23.02■■□□□ 1.28
TIMP4-201ENST00000287814 MRPL11Q9Y3B7 192 aaKnown RBP23.02■■□□□ 1.28
TIMP4-201ENST00000287814 PTPDC1A2A3K4 754 aa23.01■■□□□ 1.27
TIMP4-201ENST00000287814 POTEFA5A3E0 1075 aa23.01■■□□□ 1.27
TIMP4-201ENST00000287814 SOX10P56693 466 aa23.01■■□□□ 1.27
TIMP4-201ENST00000287814 RPS6P62753 249 aaKnown RBP23.01■■□□□ 1.27
TIMP4-201ENST00000287814 PRAMEF19Q5SWL8 479 aa23.01■■□□□ 1.27
TIMP4-201ENST00000287814 MFSD14CQ5VZR4 134 aa23.01■■□□□ 1.27
TIMP4-201ENST00000287814 RNF207Q6ZRF8 634 aa23.01■■□□□ 1.27
TIMP4-201ENST00000287814 TRPV1Q8NER1 839 aa23.01■■□□□ 1.27
TIMP4-201ENST00000287814 ZNF274Q96GC6 653 aaPredicted RBP23.01■■□□□ 1.27
TIMP4-201ENST00000287814 TINF2Q9BSI4 451 aa23.01■■□□□ 1.27
TIMP4-201ENST00000287814 RNF208Q9H0X6 261 aa23.01■■□□□ 1.27
TIMP4-201ENST00000287814 TPCN1Q9ULQ1 816 aa23.01■■□□□ 1.27
TIMP4-201ENST00000287814 DDX49Q9Y6V7 483 aaKnown RBP23.01■■□□□ 1.27
TIMP4-201ENST00000287814 CCND3P30281 292 aaPredicted RBP23■■□□□ 1.27
TIMP4-201ENST00000287814 PPP2R5BQ15173 497 aa23■■□□□ 1.27
TIMP4-201ENST00000287814 RGS22Q8NE09 1264 aa23■■□□□ 1.27
TIMP4-201ENST00000287814 RPTORQ8N122 1335 aa23■■□□□ 1.27
TIMP4-201ENST00000287814 CALML3P27482 149 aa23■■□□□ 1.27
TIMP4-201ENST00000287814 NTRK3Q16288 839 aa23■■□□□ 1.27
TIMP4-201ENST00000287814 MAMDC4Q6UXC1 1216 aa23■■□□□ 1.27
TIMP4-201ENST00000287814 ZNF467Q7Z7K2 595 aaPredicted RBP23■■□□□ 1.27
TIMP4-201ENST00000287814 V9GY48 417 aaPredicted RBP23■■□□□ 1.27
TIMP4-201ENST00000287814 MYH6P13533 1939 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms