RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 TCHHQ07283 1943 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 TRAF5O00463 557 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 BACH1O14867 736 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 ZBTB5O15062 677 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 PPP2R5BQ15173 497 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 PKN1Q16512 942 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 RPAP3Q9H6T3 665 aaPredicted RBP10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 DDX25Q9UHL0 483 aaKnown RBP10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 RRP1BQ14684 758 aaKnown RBP10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 CAGE1Q8TC20 777 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 PURBQ96QR8 312 aaKnown RBP10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 AGXT2Q9BYV1 514 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 RAB34Q9BZG1 259 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 UQCRHLA0A096LP55 91 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 UQCRHP07919 91 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 YBX3P16989 372 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 STX1AQ16623 288 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 DPCR1Q3MIW9 517 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 C17orf53Q8N3J3 647 aaPredicted RBP10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 FOXP1Q9H334 677 aaPredicted RBP10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 RCOR1Q9UKL0 485 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 PRR12Q9ULL5 1215 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 PCDHA12Q9UN75 941 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 PCDHA5Q9Y5H7 936 aa10.17□□□□□ -0.78
CCDC144B-201ENST00000285176 PNMA6FA0A0J9YX94 578 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 ZBED4O75132 1171 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 YEATS4O95619 227 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 POTEIP0CG38 1075 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 POTEJP0CG39 1038 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 SPDYE2Q495Y8 402 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 KRT25Q7Z3Z0 450 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 TMEM60Q9H2L4 133 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 CLSTN2Q9H4D0 955 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 RRAGCQ9HB90 399 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 CCP110O43303 1012 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 ENTPD3O75355 529 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 CT47A1Q5JQC4 288 aaPredicted RBP10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 C11orf57Q6ZUT1 292 aaPredicted RBP10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 NELFCDQ8IXH7 590 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 FAM163AQ96GL9 167 aaPredicted RBP10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 TRMT1Q9NXH9 659 aaKnown RBP10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 BARHL2Q9NY43 387 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 NUP188Q5SRE5 1749 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 CAP2P40123 477 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 SNRNP48Q6IEG0 339 aaKnown RBP10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 C15orf52Q6ZUT6 534 aaKnown RBP10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 ATG4CQ96DT6 458 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 SLC10A4Q96EP9 437 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 DEF6Q9H4E7 631 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 CBX8Q9HC52 389 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 HERC5Q9UII4 1024 aaKnown RBP10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 ABT1Q9ULW3 272 aaKnown RBP10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 ELP1O95163 1332 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 ZNF771Q7L3S4 317 aaPredicted RBP10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 CABP7Q86V35 215 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 IQUBQ8NA54 791 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 HPS3Q969F9 1004 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 CLMNQ96JQ2 1002 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 LZTS2Q9BRK4 669 aa10.16□□□□□ -0.78
CCDC144B-201ENST00000285176 GCOM1H8Y6P7 765 aaPredicted RBP10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 CUTAO60888 179 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 POLR2MP0CAP2 368 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 PRKCSHP14314 528 aaPredicted RBP10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 EPHX2P34913 555 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 TCERG1LQ5VWI1 586 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 ABCB11O95342 1321 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 SLX4Q8IY92 1834 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 SFI1A8K8P3 1242 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 OR52Z1P0C646 297 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 TOB1P50616 345 aaPredicted RBP10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 PABPC4Q13310 644 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 ARHGEF16Q5VV41 709 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 SEPT14Q6ZU15 432 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 CYP2W1Q8TAV3 490 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 FAM200AQ8TCP9 573 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 GPRC5DQ9NZD1 345 aa10.15□□□□□ -0.78
CCDC144B-201ENST00000285176 NHSQ6T4R5 1651 aa10.15□□□□□ -0.79
CCDC144B-201ENST00000285176 POSTNQ15063 836 aa10.15□□□□□ -0.79
CCDC144B-201ENST00000285176 LRRC41Q15345 812 aa10.15□□□□□ -0.79
CCDC144B-201ENST00000285176 TMC6Q7Z403 805 aa10.15□□□□□ -0.79
CCDC144B-201ENST00000285176 ANO3Q9BYT9 981 aa10.15□□□□□ -0.79
CCDC144B-201ENST00000285176 ALDH8A1Q9H2A2 487 aaPredicted RBP10.15□□□□□ -0.79
CCDC144B-201ENST00000285176 PCDHA6Q9UN73 950 aa10.15□□□□□ -0.79
CCDC144B-201ENST00000285176 PCDHA8Q9Y5H6 950 aa10.15□□□□□ -0.79
CCDC144B-201ENST00000285176 TNRC6CQ9HCJ0 1690 aaKnown RBP10.15□□□□□ -0.79
CCDC144B-201ENST00000285176 MATR3P43243 847 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 LDHDQ86WU2 507 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 ZNF668Q96K58 619 aaPredicted RBP10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 TRIM47Q96LD4 638 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 KIAA1024Q9UPX6 916 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 STXBP3O00186 592 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 PRR29P0C7W0 189 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 PTGER2P43116 358 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 PLA2G4DQ86XP0 818 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 PIGOQ8TEQ8 1089 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 PHF20Q9BVI0 1012 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 EXOC1Q9NV70 894 aa10.14□□□□□ -0.79
CCDC144B-201ENST00000285176 MKRN1Q9UHC7 482 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms