RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 PKD2L1Q9P0L9 805 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 KINO60870 393 aaKnown RBP11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 SHC4Q6S5L8 630 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 LDHDQ86WU2 507 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 MRPS27Q92552 414 aaKnown RBP11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 NUP62CLQ9H1M0 184 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 LAMB1P07942 1786 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 CELF2O95319 508 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 YEATS4O95619 227 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 NASPP49321 788 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 TREML2Q5T2D2 321 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 ADALQ6DHV7 355 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 GRAMD1CQ8IYS0 662 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 TMEM87AQ8NBN3 555 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 SYAP1Q96A49 352 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 SLC10A4Q96EP9 437 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 SNCAIPQ9Y6H5 919 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 GOLGA6L3A6NEY3 463 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 POLR2DO15514 142 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 PFKFB1P16118 471 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 CASP1P29466 404 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 MMP14P50281 582 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 AXDND1Q5T1B0 1012 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 PNMA8AQ86V59 439 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 JMYQ8N9B5 988 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 PRPF38AQ8NAV1 312 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 TNFRSF25Q93038 417 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 L3MBTL3Q96JM7 780 aaPredicted RBP11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 SLF1Q9BQI6 1058 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 AS3MTQ9HBK9 375 aa11.17□□□□□ -0.62
PPP4R1-201ENST00000285124 NFIBO00712 420 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 ZNF76P36508 570 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 TECP42680 631 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 SYKP43405 635 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 CCDC183Q5T5S1 534 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 CYP2W1Q8TAV3 490 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 P2RX7Q99572 595 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 KIAA1683Q9H0B3 1180 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 SH3GLB2Q9NR46 395 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 SPDYE3A6NKU9 549 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 FOXN1O15353 648 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 SORBS3O60504 671 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 ZNF202O95125 648 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 AFMP43652 599 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 DHX58Q96C10 678 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 OPTNQ96CV9 577 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 FEM1BQ9UK73 627 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 RIPK3Q9Y572 518 aa11.16□□□□□ -0.62
PPP4R1-201ENST00000285124 NEK8Q86SG6 692 aa11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 POTEDQ86YR6 584 aa11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 ELP1O95163 1332 aa11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 PRR16Q569H4 304 aa11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 PAXIP1Q6ZW49 1069 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 ARMC9Q7Z3E5 817 aa11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 KRT25Q7Z3Z0 450 aa11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 RIC8AQ9NPQ8 531 aa11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 ZNF112Q9UJU3 913 aa11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 CEP131Q9UPN4 1083 aa11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 SIPA1L1O43166 1804 aa11.15□□□□□ -0.62
PPP4R1-201ENST00000285124 MEIS2O14770 477 aa11.15□□□□□ -0.63
PPP4R1-201ENST00000285124 WDR46O15213 610 aaKnown RBP11.15□□□□□ -0.63
PPP4R1-201ENST00000285124 SLC37A4O43826 429 aa11.15□□□□□ -0.63
PPP4R1-201ENST00000285124 LONRF3Q496Y0 759 aa11.15□□□□□ -0.63
PPP4R1-201ENST00000285124 MUM1L1Q5H9M0 696 aa11.15□□□□□ -0.63
PPP4R1-201ENST00000285124 ATL3Q6DD88 541 aa11.15□□□□□ -0.63
PPP4R1-201ENST00000285124 ANKRD13AQ8IZ07 590 aa11.15□□□□□ -0.63
PPP4R1-201ENST00000285124 FBXO2Q9UK22 296 aaPredicted RBP11.15□□□□□ -0.63
PPP4R1-201ENST00000285124 KCNH3Q9ULD8 1083 aa11.15□□□□□ -0.63
PPP4R1-201ENST00000285124 AFG3L2Q9Y4W6 797 aa11.15□□□□□ -0.63
PPP4R1-201ENST00000285124 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 ARFGEF1Q9Y6D6 1849 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 ZBED4O75132 1171 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 SMARCA1P28370 1054 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 USP14P54578 494 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 SNW1Q13573 536 aaKnown RBP11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 IL17AQ16552 155 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 SNRNP48Q6IEG0 339 aaKnown RBP11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 ANO3Q9BYT9 981 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 SBF1O95248 1867 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 NEMFO60524 1076 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 PTPREP23469 700 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 FAM160A1Q05DH4 1040 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 MAP3K11Q16584 847 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 DTHD1Q6ZMT9 781 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 CNNM3Q8NE01 707 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 RBSNQ9H1K0 784 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 SERTAD1Q9UHV2 236 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 PPP2R3BQ9Y5P8 575 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 ZNF646O15015 1829 aaPredicted RBP11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 MYH8P13535 1937 aa11.14□□□□□ -0.63
PPP4R1-201ENST00000285124 SSC5DA1L4H1 1573 aa11.13□□□□□ -0.63
PPP4R1-201ENST00000285124 M0R2N6 131 aa11.13□□□□□ -0.63
PPP4R1-201ENST00000285124 OPLAHO14841 1288 aa11.13□□□□□ -0.63
PPP4R1-201ENST00000285124 MYCLP12524 364 aaPredicted RBP11.13□□□□□ -0.63
PPP4R1-201ENST00000285124 IRX3P78415 501 aaPredicted RBP11.13□□□□□ -0.63
PPP4R1-201ENST00000285124 KARSQ15046 597 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms