RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 KIF5CO60282 957 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 CASQ1P31415 396 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 MORC3Q14149 939 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 DALRD3Q5D0E6 543 aaKnown RBP10.07□□□□□ -0.8
SEC16A-201ENST00000277537 SPATA1Q5VX52 437 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 POLD4Q9HCU8 107 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 GOPCQ9HD26 462 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 DISC1Q9NRI5 854 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 SIPA1L3O60292 1781 aaPredicted RBP10.07□□□□□ -0.8
SEC16A-201ENST00000277537 PSDA5PKW4 1024 aaPredicted RBP10.07□□□□□ -0.8
SEC16A-201ENST00000277537 FGFR1OPO95684 399 aaKnown RBP10.07□□□□□ -0.8
SEC16A-201ENST00000277537 RHBDL3P58872 404 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 MCM6Q14566 821 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 QRICH1Q2TAL8 776 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 HHIPL2Q6UWX4 724 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 TMEM179Q6ZVK1 233 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 PLA2G4DQ86XP0 818 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 FAM114A1Q8IWE2 563 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 UBXN4Q92575 508 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 NOC4LQ9BVI4 516 aaKnown RBP10.07□□□□□ -0.8
SEC16A-201ENST00000277537 LRRC27Q9C0I9 530 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 SH3GLB2Q9NR46 395 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 SUGT1Q9Y2Z0 365 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.07□□□□□ -0.81e-9■■■■□ 19.8
SEC16A-201ENST00000277537 FAM205AQ6ZU69 1335 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 KIF2AO00139 706 aaPredicted RBP10.07□□□□□ -0.8
SEC16A-201ENST00000277537 STXBP3O00186 592 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 ZBTB5O15062 677 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 MYCLP12524 364 aaPredicted RBP10.07□□□□□ -0.8
SEC16A-201ENST00000277537 ALAS1P13196 640 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 LRRC41Q15345 812 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 TBC1D10BQ4KMP7 808 aaPredicted RBP10.07□□□□□ -0.8
SEC16A-201ENST00000277537 DPF2Q92785 391 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 SH2D4AQ9H788 454 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 IMPACTQ9P2X3 320 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 KIAA1024Q9UPX6 916 aa10.07□□□□□ -0.8
SEC16A-201ENST00000277537 LAMB4A4D0S4 1761 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 BICDL2A1A5D9 508 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 MEIS1O00470 390 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 CNNM4Q6P4Q7 775 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 ARHGAP27Q6ZUM4 889 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 TPH2Q8IWU9 490 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 SEPT11Q9NVA2 429 aaKnown RBP10.06□□□□□ -0.8
SEC16A-201ENST00000277537 XIRP1Q702N8 1843 aaKnown RBP10.06□□□□□ -0.8
SEC16A-201ENST00000277537 PDS5AQ29RF7 1337 aaKnown RBP10.06□□□□□ -0.8
SEC16A-201ENST00000277537 KCNJ18B7U540 433 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 PSMD14O00487 310 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 CYTH3O43739 400 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 KRT9P35527 623 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 ZNF543Q08ER8 600 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 KCNJ12Q14500 433 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 TEX35Q5T0J7 233 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 ARL6IP4Q66PJ3 421 aaKnown RBP10.06□□□□□ -0.8
SEC16A-201ENST00000277537 CIAPIN1Q6FI81 312 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 SYCP3Q8IZU3 236 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 PDCL2Q8N4E4 241 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 CHURC1Q8WUH1 139 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 LUC7L2Q9Y383 392 aaKnown RBP10.06□□□□□ -0.8
SEC16A-201ENST00000277537 NUP98P52948 1817 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 PALM3A6NDB9 673 aaPredicted RBP10.06□□□□□ -0.8
SEC16A-201ENST00000277537 TRIM49BA6NDI0 452 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 FMR1Q06787 632 aaKnown RBP eCLIP10.06□□□□□ -0.82e-6■■■□□ 16.6
SEC16A-201ENST00000277537 TRAF1Q13077 416 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 SPA17Q15506 151 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 FAM83BQ5T0W9 1011 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 TYW1BQ6NUM6 668 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 SPZ1Q9BXG8 430 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 TAOK3Q9H2K8 898 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 KCNF1Q9H3M0 494 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 ITGB4P16144 1822 aa10.06□□□□□ -0.8
SEC16A-201ENST00000277537 COL1A1P02452 1464 aaPredicted RBP10.06□□□□□ -0.8
SEC16A-201ENST00000277537 SYDE2Q5VT97 1194 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.05□□□□□ -0.8
SEC16A-201ENST00000277537 PICK1Q9NRD5 415 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 PAXBP1Q9Y5B6 917 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 WNT7AO00755 349 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 FLOT1O75955 427 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 KIF20AO95235 890 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 STAT2P52630 851 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 APOBEC3HQ6NTF7 200 aaKnown RBP10.05□□□□□ -0.8
SEC16A-201ENST00000277537 CCDC65Q8IXS2 484 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 ENOX1Q8TC92 643 aaKnown RBP10.05□□□□□ -0.8
SEC16A-201ENST00000277537 PDGFDQ9GZP0 370 aaPredicted RBP10.05□□□□□ -0.8
SEC16A-201ENST00000277537 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 FAM170AA1A519 330 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 H7C1D1 291 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 AKR1B10O60218 316 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 ONECUT3O60422 494 aaPredicted RBP10.05□□□□□ -0.8
SEC16A-201ENST00000277537 SORBS3O60504 671 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 CCDC175P0C221 793 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 ERCC5P28715 1186 aaPredicted RBP10.05□□□□□ -0.8
SEC16A-201ENST00000277537 CHMP4BP1P59074 171 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 PABPC4Q13310 644 aaKnown RBP eCLIP10.05□□□□□ -0.83e-13■■■□□ 15.3
SEC16A-201ENST00000277537 R3HDM1Q15032 1099 aaKnown RBP10.05□□□□□ -0.8
SEC16A-201ENST00000277537 KMT5BQ4FZB7 885 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 STYK1Q6J9G0 422 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 RBM43Q6ZSC3 357 aaKnown RBP10.05□□□□□ -0.8
SEC16A-201ENST00000277537 GPBP1Q86WP2 473 aa10.05□□□□□ -0.8
SEC16A-201ENST00000277537 LARP4BQ92615 738 aaKnown RBP10.05□□□□□ -0.8
SEC16A-201ENST00000277537 HPS3Q969F9 1004 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms