RNA–Protein interactions for RNA: ENST00000274456.6

TNFAIP8-201, Transcript of TNF alpha induced protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP8, Length 795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-201ENST00000274456 GPR25O00155 361 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 ATP2A1O14983 1001 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 ERVK-9P63128 1117 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 ERVK-24P63145 666 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 FUT2Q10981 343 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 IKQ13123 557 aaPredicted RBP10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 NBR1Q14596 966 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 TMEM132BQ14DG7 1078 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 SAFBQ15424 915 aaKnown RBP eCLIP10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 FAM110CQ1W6H9 321 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 MCTP1Q6DN14 999 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 FERMT3Q86UX7 667 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 ADGRF4Q8IZF3 695 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 CMTR1Q8N1G2 835 aaKnown RBP10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 SRBD1Q8N5C6 995 aaKnown RBP10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 ANKRD13CQ8N6S4 541 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 FBXO18Q8NFZ0 1043 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 RANBP17Q9H2T7 1088 aaKnown RBP10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 JMJD4Q9H9V9 463 aa10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 ZNF214Q9UL59 606 aaPredicted RBP10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 V9GY48 417 aaPredicted RBP10.65□□□□□ -0.7
TNFAIP8-201ENST00000274456 BAZ2BQ9UIF8 2168 aaKnown RBP10.65□□□□□ -0.71
TNFAIP8-201ENST00000274456 A0A0G2JMZ2 1700 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 ZNF536O15090 1300 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 CNTNAP5Q8WYK1 1306 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 FOXN1O15353 648 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 ZBED4O75132 1171 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 HSPA1AP0DMV8 641 aaKnown RBP10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 HSPA1BP0DMV9 641 aaKnown RBP10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 SNAP25P60880 206 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 GUCY1B3Q02153 619 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 GNL2Q13823 731 aaKnown RBP10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 CSPP1Q1MSJ5 1256 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 GPRC5AQ8NFJ5 357 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 SPZ1Q9BXG8 430 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 SPATC1LQ9H0A9 340 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 TSKSQ9UJT2 592 aa10.64□□□□□ -0.71
TNFAIP8-201ENST00000274456 COL11A1P12107 1806 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 SCG2P13521 617 aa10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 NCLP19338 710 aaKnown RBP10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 OAZ1P54368 228 aa10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 SP3Q02447 781 aa10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 RESTQ13127 1097 aa10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 FOXD4L6Q3SYB3 417 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 KRT40Q6A162 431 aa10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 FOXD4L3Q6VB84 417 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 RIOX2Q8IUF8 465 aa10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 PAGR1Q9BTK6 254 aa10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 MOV10L1Q9BXT6 1211 aaKnown RBP10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 RAVER2Q9HCJ3 691 aaKnown RBP10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 VAT1LQ9HCJ6 419 aa10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 SEC63Q9UGP8 760 aaKnown RBP10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 SMCHD1A6NHR9 2005 aa10.63□□□□□ -0.71
TNFAIP8-201ENST00000274456 FKTNO75072 461 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 ICAM1P05362 532 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 HSPA8P11142 646 aaKnown RBP10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 CTGFP29279 349 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 STAT3P40763 770 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 KRT85P78386 507 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 CAP1Q01518 475 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 PKN1Q16512 942 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 CDC37Q16543 378 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 PFKFB3Q16875 520 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 QRICH1Q2TAL8 776 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 ATL3Q6DD88 541 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 BRAPQ7Z569 592 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 CPXCR1Q8N123 301 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 ZNF296Q8WUU4 475 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 RRP36Q96EU6 259 aaKnown RBP10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 AGBL1Q96MI9 1066 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 ZNF396Q96N95 335 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 AIFM3Q96NN9 605 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 PIGSQ96S52 555 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 TEX13BQ9BXU2 312 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 PORCNQ9H237 461 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 BRMS1Q9HCU9 246 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 RIPK3Q9Y572 518 aa10.62□□□□□ -0.71
TNFAIP8-201ENST00000274456 PNMA6FA0A0J9YX94 578 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 hCG_1642624A0A1W2PR95 340 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 ZBTB5O15062 677 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 PPP1R11O60927 126 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 SLC25A27O95847 323 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 MMP1P03956 469 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 ERCC3P19447 782 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 CTCFP49711 727 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 CCNA1P78396 465 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 LACTBP83111 547 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 DNM1Q05193 864 aaKnown RBP10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 PLS1Q14651 629 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 CCDC174Q6PII3 467 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 FAM177A1Q8N128 213 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 SHCBP1Q8NEM2 672 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 PIBF1Q8WXW3 757 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 EFCC1Q9HA90 598 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 SH3GLB2Q9NR46 395 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 CFAP45Q9UL16 551 aa10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 CTDP1Q9Y5B0 961 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP8-201ENST00000274456 DOCK3Q8IZD9 2030 aa10.6□□□□□ -0.71
TNFAIP8-201ENST00000274456 hCG_1984214I3L0E3 225 aa10.6□□□□□ -0.71
TNFAIP8-201ENST00000274456 PRPF40AO75400 957 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms