RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 IWS1Q96ST2 819 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 DRC3Q9H069 523 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 SEPT9Q9UHD8 586 aaPredicted RBP13.75□□□□□ -0.21
CDH11-201ENST00000268603 PTPRKQ15262 1439 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 hCG_1642624A0A1W2PR95 340 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 SGK1O00141 431 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 GTF2IP78347 998 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 HSP90AA5PQ58FG0 334 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 LRCH2Q5VUJ6 765 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 EFCAB13Q8IY85 973 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 EXT2Q93063 718 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 DAAM1Q9Y4D1 1078 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 ARHGAP6O43182 974 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 EEF1GP26641 437 aaKnown RBP13.75□□□□□ -0.21
CDH11-201ENST00000268603 TFDP1Q14186 410 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 EPS15L1Q9UBC2 864 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 KCNH3Q9ULD8 1083 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 CAPN7Q9Y6W3 813 aa13.75□□□□□ -0.21
CDH11-201ENST00000268603 STAT1P42224 750 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 KCTD2Q14681 263 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 GLE1Q53GS7 698 aaKnown RBP13.74□□□□□ -0.21
CDH11-201ENST00000268603 ABHD8Q96I13 439 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 ZNF148Q9UQR1 794 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.74□□□□□ -0.21
CDH11-201ENST00000268603 PLCH2O75038 1416 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 SERPINI2O75830 405 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 PIDD1Q9HB75 910 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.74□□□□□ -0.21
CDH11-201ENST00000268603 PLB1Q6P1J6 1458 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 POLR2MP0CAP2 368 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 FAM47AQ5JRC9 791 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 CCDC127Q96BQ5 260 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 ANKRD36BP1Q96IX9 119 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 LARSQ9P2J5 1176 aaKnown RBP13.74□□□□□ -0.21
CDH11-201ENST00000268603 GOLGA8QA0A0J9YX86 632 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 GOLGA8OA6NCC3 632 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 GOLGA8NF8WBI6 632 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 TRPA1O75762 1119 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 NSUN2Q08J23 767 aaKnown RBP eCLIP13.74□□□□□ -0.21
CDH11-201ENST00000268603 SNX1Q13596 522 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 GIMAP4Q9NUV9 329 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 ATF2P15336 505 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 KLHDC4Q8TBB5 520 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 UBE2Q2Q8WVN8 375 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 TRIM55Q9BYV6 548 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 ZKSCAN5Q9Y2L8 839 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 PCDHB4Q9Y5E5 795 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 ATP8B3O60423 1300 aa13.74□□□□□ -0.21
CDH11-201ENST00000268603 WBP4O75554 376 aaKnown RBP13.73□□□□□ -0.21
CDH11-201ENST00000268603 PMLP29590 882 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 TMEM259Q4ZIN3 620 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 ARMCX5Q6P1M9 558 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 C7orf31Q8N865 590 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 MYL10Q9BUA6 226 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 TAF11Q15544 211 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 PPM1KQ8N3J5 372 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 NCOA1Q15788 1441 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 VGLL3A8MV65 326 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 POC1B-GALNT4F8VUJ3 575 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 ESRRGP62508 458 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 CCNA1P78396 465 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 MCF2L2Q86YR7 1114 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 RNF139Q8WU17 664 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 TPCN1Q9ULQ1 816 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 KCNK3O14649 394 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 INHBAP08476 426 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 XRCC5P13010 732 aaKnown RBP13.73□□□□□ -0.21
CDH11-201ENST00000268603 CTNNA1P35221 906 aaKnown RBP13.73□□□□□ -0.21
CDH11-201ENST00000268603 VCPP55072 806 aaKnown RBP13.73□□□□□ -0.21
CDH11-201ENST00000268603 DOK7Q18PE1 504 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 NDUFAF2Q8N183 169 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 STAMQ92783 540 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 ERO1AQ96HE7 468 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 PCDH11XQ9BZA7 1347 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 PCDH11YQ9BZA8 1340 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 LRRD1A4D1F6 860 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 TBC1D10BQ4KMP7 808 aaPredicted RBP13.73□□□□□ -0.21
CDH11-201ENST00000268603 CARD6Q9BX69 1037 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 ATP8B2P98198 1209 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 TUBB2AQ13885 445 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 ZFYVE19Q96K21 471 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 TUBB2BQ9BVA1 445 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 ABCA10Q8WWZ4 1543 aa13.73□□□□□ -0.21
CDH11-201ENST00000268603 EFCAB14O75071 495 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 RECQLP46063 649 aaPredicted RBP13.72□□□□□ -0.21
CDH11-201ENST00000268603 POLA2Q14181 598 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 DPH5Q9H2P9 285 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 MRPL11Q9Y3B7 192 aaKnown RBP13.72□□□□□ -0.21
CDH11-201ENST00000268603 KRIT1O00522 736 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 KCNA1Q09470 495 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 CAPRIN1Q14444 709 aaKnown RBP13.72□□□□□ -0.21
CDH11-201ENST00000268603 SMC5Q8IY18 1101 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 TEKT3Q9BXF9 490 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 LUC7L3O95232 432 aaKnown RBP13.72□□□□□ -0.21
CDH11-201ENST00000268603 SCNN1DP51172 638 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 KHDRBS2Q5VWX1 349 aaKnown RBP13.72□□□□□ -0.21
CDH11-201ENST00000268603 DDX41Q9UJV9 622 aaKnown RBP13.72□□□□□ -0.21
CDH11-201ENST00000268603 G3BP2Q9UN86 482 aaKnown RBP13.72□□□□□ -0.21
CDH11-201ENST00000268603 PTPN22Q9Y2R2 807 aa13.72□□□□□ -0.21
CDH11-201ENST00000268603 TRIM60Q495X7 471 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms