RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MCTP2Q6DN12 878 aa18.61■□□□□ 0.57
TPM1-201ENST00000267996 SASS6Q6UVJ0 657 aa18.61■□□□□ 0.57
TPM1-201ENST00000267996 KRBA2Q6ZNG9 492 aa18.61■□□□□ 0.57
TPM1-201ENST00000267996 USP50Q70EL3 339 aaPredicted RBP18.61■□□□□ 0.57
TPM1-201ENST00000267996 VWA3AA6NCI4 1184 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 MEIS2O14770 477 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 LONP1P36776 959 aaKnown RBP18.6■□□□□ 0.57
TPM1-201ENST00000267996 LETM2Q2VYF4 491 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 LONRF3Q496Y0 759 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 ZKSCAN4Q969J2 545 aaPredicted RBP18.6■□□□□ 0.57
TPM1-201ENST00000267996 DCPSQ96C86 337 aaKnown RBP18.6■□□□□ 0.57
TPM1-201ENST00000267996 AS3MTQ9HBK9 375 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 PICK1Q9NRD5 415 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 KIAA1468Q9P260 1216 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 OPLAHO14841 1288 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 USP2O75604 605 aaPredicted RBP18.6■□□□□ 0.57
TPM1-201ENST00000267996 USP14P54578 494 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 AP3B2Q13367 1082 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 UVSSAQ2YD98 709 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 RNF214Q8ND24 703 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.6■□□□□ 0.57
TPM1-201ENST00000267996 ZC3H15Q8WU90 426 aaKnown RBP18.6■□□□□ 0.57
TPM1-201ENST00000267996 SYMPKQ92797 1274 aaKnown RBP18.6■□□□□ 0.57
TPM1-201ENST00000267996 KIFC2Q96AC6 838 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 EPSTI1Q96J88 318 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 EMILIN3Q9NT22 766 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 FBXO28Q9NVF7 368 aa18.6■□□□□ 0.57
TPM1-201ENST00000267996 PHIPQ8WWQ0 1821 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 GLTPD2A6NH11 291 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 USP17L15C9J2P7 530 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 USP17L13C9JLJ4 530 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 USP17L11C9JVI0 530 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 USP17L18D6R9N7 530 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 USP17L22D6RA61 530 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 USP17L17D6RBQ6 530 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 USP17L19D6RCP7 530 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 USP17L20D6RJB6 530 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 POLR2DO15514 142 aaKnown RBP18.59■□□□□ 0.57
TPM1-201ENST00000267996 NEMFO60524 1076 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 CCNT1O60563 726 aaKnown RBP18.59■□□□□ 0.57
TPM1-201ENST00000267996 BACE1P56817 501 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 USP17L24Q0WX57 530 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 PPP4R3AQ6IN85 833 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 USP17L6PQ6QN14 398 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 DTHD1Q6ZMT9 781 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 SULF1Q8IWU6 871 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 ZNF280CQ8ND82 737 aa18.59■□□□□ 0.57
TPM1-201ENST00000267996 PIK3CDO00329 1044 aa18.58■□□□□ 0.57
TPM1-201ENST00000267996 ACTN4O43707 911 aaKnown RBP18.58■□□□□ 0.57
TPM1-201ENST00000267996 CAVIN2O95810 425 aa18.58■□□□□ 0.57
TPM1-201ENST00000267996 OR52Z1P0C646 297 aa18.58■□□□□ 0.57
TPM1-201ENST00000267996 MDM2Q00987 491 aaPredicted RBP18.58■□□□□ 0.57
TPM1-201ENST00000267996 SPP2Q13103 211 aa18.58■□□□□ 0.57
TPM1-201ENST00000267996 MTMR2Q13614 643 aa18.58■□□□□ 0.57
TPM1-201ENST00000267996 USH1GQ495M9 461 aa18.58■□□□□ 0.57
TPM1-201ENST00000267996 CNNM3Q8NE01 707 aa18.58■□□□□ 0.57
TPM1-201ENST00000267996 C12orf42Q96LP6 360 aa18.58■□□□□ 0.57
TPM1-201ENST00000267996 FZD1Q9UP38 647 aa18.58■□□□□ 0.57
TPM1-201ENST00000267996 SMCHD1A6NHR9 2005 aa18.58■□□□□ 0.56
TPM1-201ENST00000267996 PAPPA2Q9BXP8 1791 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 MYH7BA7E2Y1 1941 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 A0A087X0B3 334 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 EPHX2P34913 555 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 STX1AQ16623 288 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 ANO6Q4KMQ2 910 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 PRPF38AQ8NAV1 312 aaKnown RBP18.57■□□□□ 0.56
TPM1-201ENST00000267996 FAM200AQ8TCP9 573 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 CRYGNQ8WXF5 182 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 MTMR9Q96QG7 549 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 P2RX7Q99572 595 aaKnown RBP18.57■□□□□ 0.56
TPM1-201ENST00000267996 SLF1Q9BQI6 1058 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 USP25Q9UHP3 1055 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 TUBE1Q9UJT0 475 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 ADM5C9JUS6 153 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 FOSP01100 380 aaPredicted RBP18.57■□□□□ 0.56
TPM1-201ENST00000267996 GCFC2P16383 781 aaKnown RBP18.57■□□□□ 0.56
TPM1-201ENST00000267996 VCAM1P19320 739 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 KANK3Q6NY19 840 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 NAP1L4Q99733 375 aaKnown RBP18.57■□□□□ 0.56
TPM1-201ENST00000267996 ANO3Q9BYT9 981 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 SERTAD1Q9UHV2 236 aa18.57■□□□□ 0.56
TPM1-201ENST00000267996 SCN4AP35499 1836 aa18.56■□□□□ 0.56
TPM1-201ENST00000267996 C19orf81C9J6K1 198 aa18.56■□□□□ 0.56
TPM1-201ENST00000267996 TDP2O95551 362 aa18.56■□□□□ 0.56
TPM1-201ENST00000267996 TAL1P17542 331 aaPredicted RBP18.56■□□□□ 0.56
TPM1-201ENST00000267996 USP11P51784 963 aa18.56■□□□□ 0.56
TPM1-201ENST00000267996 ERCC4Q92889 916 aaPredicted RBP18.56■□□□□ 0.56
TPM1-201ENST00000267996 AK8Q96MA6 479 aa18.56■□□□□ 0.56
TPM1-201ENST00000267996 MBOAT7Q96N66 472 aa18.56■□□□□ 0.56
TPM1-201ENST00000267996 PYM1Q9BRP8 204 aaKnown RBP18.56■□□□□ 0.56
TPM1-201ENST00000267996 ANO10Q9NW15 660 aa18.56■□□□□ 0.56
TPM1-201ENST00000267996 ZHX2Q9Y6X8 837 aa18.56■□□□□ 0.56
TPM1-201ENST00000267996 ABCB11O95342 1321 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 CYP3A7-CYP3A51PA0A087WV96 503 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 SLFN14P0C7P3 912 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 CYP3A7P24462 503 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 MAP3K9P80192 1104 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 DGKZQ13574 1117 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 E2F4Q16254 413 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 CCDC174Q6PII3 467 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms