RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 CCDC84Q86UT8 332 aaPredicted RBP23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 PDILTQ8N807 584 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 GLIS2Q9BZE0 524 aaPredicted RBP23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 TMEM60Q9H2L4 133 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 SERTAD1Q9UHV2 236 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 PRR12Q9ULL5 1215 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 LONP1P36776 959 aaKnown RBP23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 ZNF165P49910 485 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 ORC2Q13416 577 aaPredicted RBP23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 ZRSR1Q15695 479 aaKnown RBP23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 ZYXQ15942 572 aaKnown RBP23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 DCAF15Q66K64 600 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 FBXO11Q86XK2 927 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 RNF181Q9P0P0 153 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 USP25Q9UHP3 1055 aa23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 HOOK1Q9UJC3 728 aaKnown RBP23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.35■■□□□ 1.33
LYSMD2-201ENST00000267838 YBX3P16989 372 aaKnown RBP eCLIP23.34■■□□□ 1.33
LYSMD2-201ENST00000267838 PNOCQ13519 176 aa23.34■■□□□ 1.33
LYSMD2-201ENST00000267838 C11orf57Q6ZUT1 292 aaPredicted RBP23.34■■□□□ 1.33
LYSMD2-201ENST00000267838 TUBE1Q9UJT0 475 aa23.34■■□□□ 1.33
LYSMD2-201ENST00000267838 A0A087WWV3 80 aa23.33■■□□□ 1.33
LYSMD2-201ENST00000267838 ACTN4O43707 911 aaKnown RBP23.33■■□□□ 1.33
LYSMD2-201ENST00000267838 PRPHP41219 470 aa23.33■■□□□ 1.33
LYSMD2-201ENST00000267838 DTHD1Q6ZMT9 781 aa23.33■■□□□ 1.33
LYSMD2-201ENST00000267838 LUZP1Q86V48 1076 aa23.33■■□□□ 1.33
LYSMD2-201ENST00000267838 HOOK2Q96ED9 719 aa23.33■■□□□ 1.33
LYSMD2-201ENST00000267838 ZNF341Q9BYN7 854 aa23.33■■□□□ 1.33
LYSMD2-201ENST00000267838 GGA3Q9NZ52 723 aa23.33■■□□□ 1.33
LYSMD2-201ENST00000267838 UTRNP46939 3433 aa23.33■■□□□ 1.33
LYSMD2-201ENST00000267838 A0A087X0B3 334 aa23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 NEMFO60524 1076 aa23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 ADCY5O95622 1261 aa23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 TPM3P06753 285 aa23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 HIRAP54198 1017 aaPredicted RBP23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 MDM2Q00987 491 aaPredicted RBP23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 KANK3Q6NY19 840 aa23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 CHURC1Q8WUH1 139 aa23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 FEZ1Q99689 392 aa23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 PLA2G6O60733 806 aa23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 DDNO94850 711 aaPredicted RBP23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 DHX58Q96C10 678 aa23.32■■□□□ 1.32
LYSMD2-201ENST00000267838 OR52Z1P0C646 297 aa23.31■■□□□ 1.32
LYSMD2-201ENST00000267838 NLRP12P59046 1061 aa23.31■■□□□ 1.32
LYSMD2-201ENST00000267838 USH1GQ495M9 461 aa23.31■■□□□ 1.32
LYSMD2-201ENST00000267838 FAM160B2Q86V87 743 aa23.31■■□□□ 1.32
LYSMD2-201ENST00000267838 CEP57L1Q8IYX8 460 aa23.31■■□□□ 1.32
LYSMD2-201ENST00000267838 PPP2R3BQ9Y5P8 575 aa23.31■■□□□ 1.32
LYSMD2-201ENST00000267838 DOCK1Q14185 1865 aa23.31■■□□□ 1.32
LYSMD2-201ENST00000267838 BIN1O00499 593 aa23.3■■□□□ 1.32
LYSMD2-201ENST00000267838 FOXN1O15353 648 aa23.3■■□□□ 1.32
LYSMD2-201ENST00000267838 INPP5BP32019 993 aa23.3■■□□□ 1.32
LYSMD2-201ENST00000267838 POSTNQ15063 836 aa23.3■■□□□ 1.32
LYSMD2-201ENST00000267838 FEM1BQ9UK73 627 aa23.3■■□□□ 1.32
LYSMD2-201ENST00000267838 USP17L15C9J2P7 530 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 USP17L13C9JLJ4 530 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 USP17L11C9JVI0 530 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 USP17L18D6R9N7 530 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 USP17L22D6RA61 530 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 USP17L17D6RBQ6 530 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 USP17L19D6RCP7 530 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 USP17L20D6RJB6 530 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 EDIL3O43854 480 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 USP17L24Q0WX57 530 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 PRAMEF18Q5VWM3 479 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 USP17L6PQ6QN14 398 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 CCDC34Q96HJ3 373 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 MAP7D2Q96T17 732 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 PYM1Q9BRP8 204 aaKnown RBP23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 NAT10Q9H0A0 1025 aaKnown RBP23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 ZNF112Q9UJU3 913 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 SLFN14P0C7P3 912 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 PRKCSHP14314 528 aaPredicted RBP23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 LMOD1P29536 600 aaPredicted RBP23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 TXLNAP40222 546 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 TRAF1Q13077 416 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 IQCB1Q15051 598 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 DPCR1Q3MIW9 517 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 KIFC2Q96AC6 838 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 KIAA1683Q9H0B3 1180 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 RANBP17Q9H2T7 1088 aaKnown RBP23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 PCDHA5Q9Y5H7 936 aa23.29■■□□□ 1.32
LYSMD2-201ENST00000267838 MEIS2O14770 477 aa23.28■■□□□ 1.32
LYSMD2-201ENST00000267838 POTEDQ86YR6 584 aa23.28■■□□□ 1.32
LYSMD2-201ENST00000267838 PDCL3Q9H2J4 239 aa23.28■■□□□ 1.32
LYSMD2-201ENST00000267838 MYH7BA7E2Y1 1941 aa23.28■■□□□ 1.32
LYSMD2-201ENST00000267838 TDP2O95551 362 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 PRR29P0C7W0 189 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 AP3B2Q13367 1082 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 C9orf131Q5VYM1 1079 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 MCTP2Q6DN12 878 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 SCYL3Q8IZE3 742 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 LPAR1Q92633 364 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 ADARB2Q9NS39 739 aaKnown RBP23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 UQCRHLA0A096LP55 91 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 DYNC1I1O14576 645 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 WDR46O15213 610 aaKnown RBP23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 UQCRHP07919 91 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 E2F4Q16254 413 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 PPP4R3AQ6IN85 833 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms