RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 PAPD7Q5XG87 772 aaKnown RBP18.9■□□□□ 0.62
RTN1-201ENST00000267484 HDAC7Q8WUI4 952 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 PYM1Q9BRP8 204 aaKnown RBP18.9■□□□□ 0.62
RTN1-201ENST00000267484 LRWD1Q9UFC0 647 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 A0A1W2PQC6 194 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 KRT86O43790 486 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 CALML3P27482 149 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 GGCXP38435 758 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 STIM1Q13586 685 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 TXNRD1Q16881 649 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 TTYH3Q9C0H2 523 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 THAP9Q9H5L6 903 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 EHD2Q9NZN4 543 aa18.9■□□□□ 0.62
RTN1-201ENST00000267484 ABCA3Q99758 1704 aa18.89■□□□□ 0.62
RTN1-201ENST00000267484 KIF5BP33176 963 aa18.89■□□□□ 0.61
RTN1-201ENST00000267484 DNM2P50570 870 aa18.89■□□□□ 0.61
RTN1-201ENST00000267484 TUBB4BP68371 445 aa18.89■□□□□ 0.61
RTN1-201ENST00000267484 ATP2B2Q01814 1243 aa18.89■□□□□ 0.61
RTN1-201ENST00000267484 MLXIPQ9HAP2 919 aa18.89■□□□□ 0.61
RTN1-201ENST00000267484 KBTBD4Q9NVX7 518 aa18.89■□□□□ 0.61
RTN1-201ENST00000267484 RHOBTB3O94955 611 aa18.89■□□□□ 0.61
RTN1-201ENST00000267484 CXCR5P32302 372 aa18.89■□□□□ 0.61
RTN1-201ENST00000267484 ASIC1P78348 528 aa18.89■□□□□ 0.61
RTN1-201ENST00000267484 LETM2Q2VYF4 491 aa18.89■□□□□ 0.61
RTN1-201ENST00000267484 BSDC1Q9NW68 430 aaPredicted RBP18.89■□□□□ 0.61
RTN1-201ENST00000267484 EPHB6O15197 1021 aa18.88■□□□□ 0.61
RTN1-201ENST00000267484 ADAMTS2O95450 1211 aa18.88■□□□□ 0.61
RTN1-201ENST00000267484 KRT83P78385 493 aa18.88■□□□□ 0.61
RTN1-201ENST00000267484 NOC4LQ9BVI4 516 aaKnown RBP18.88■□□□□ 0.61
RTN1-201ENST00000267484 STX8Q9UNK0 236 aa18.88■□□□□ 0.61
RTN1-201ENST00000267484 ZC3H4Q9UPT8 1303 aaKnown RBP18.88■□□□□ 0.61
RTN1-201ENST00000267484 ZNHIT6Q9NWK9 470 aaKnown RBP18.88■□□□□ 0.61
RTN1-201ENST00000267484 CAPN6Q9Y6Q1 641 aa18.88■□□□□ 0.61
RTN1-201ENST00000267484 CYLC1P35663 651 aaPredicted RBP18.88■□□□□ 0.61
RTN1-201ENST00000267484 MEA1Q16626 185 aa18.88■□□□□ 0.61
RTN1-201ENST00000267484 CCDC96Q2M329 555 aa18.88■□□□□ 0.61
RTN1-201ENST00000267484 FAM207AQ9NSI2 230 aaPredicted RBP18.88■□□□□ 0.61
RTN1-201ENST00000267484 MAD2L2Q9UI95 211 aa18.88■□□□□ 0.61
RTN1-201ENST00000267484 MYH14Q7Z406 1995 aaKnown RBP18.87■□□□□ 0.61
RTN1-201ENST00000267484 M0R2N6 131 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 PRPF6O94906 941 aaKnown RBP18.87■□□□□ 0.61
RTN1-201ENST00000267484 IPO7O95373 1038 aaKnown RBP18.87■□□□□ 0.61
RTN1-201ENST00000267484 SLC7A5Q01650 507 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 CABP7Q86V35 215 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 ANKRD13CQ8N6S4 541 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 AFAP1L1Q8TED9 768 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 COG1Q8WTW3 980 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 P2RX5Q93086 422 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 SELENOOQ9BVL4 669 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 SLC39A2Q9NP94 309 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 MED4Q9NPJ6 270 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 KCNB1Q14721 858 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 MIIPQ5JXC2 388 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 ACBD3Q9H3P7 528 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 CCNT1O60563 726 aaKnown RBP18.87■□□□□ 0.61
RTN1-201ENST00000267484 PCP11498 1178 aaKnown RBP18.87■□□□□ 0.61
RTN1-201ENST00000267484 TECP42680 631 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 FBXO33Q7Z6M2 555 aa18.87■□□□□ 0.61
RTN1-201ENST00000267484 RRP36Q96EU6 259 aaKnown RBP18.87■□□□□ 0.61
RTN1-201ENST00000267484 MSL3Q8N5Y2 521 aaKnown RBP18.86■□□□□ 0.61
RTN1-201ENST00000267484 TRIM9Q9C026 710 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 VAT1LQ9HCJ6 419 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 A0A1B0GUL6 1792 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 MOCS3O95396 460 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 GOLGA6L1Q8N7Z2 621 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 EHD4Q9H223 541 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 MKNK2Q9HBH9 465 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 FLT1P17948 1338 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 AGPSO00116 658 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 KCNQ2O43526 872 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 IVLP07476 585 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 HIBADHP31937 336 aaKnown RBP18.86■□□□□ 0.61
RTN1-201ENST00000267484 ZBED6P86452 979 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 DIXDC1Q155Q3 683 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 C2CD5Q86YS7 1000 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 CCDC42Q96M95 316 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 ATP8A2Q9NTI2 1148 aa18.86■□□□□ 0.61
RTN1-201ENST00000267484 ARPP21Q9UBL0 812 aaPredicted RBP18.86■□□□□ 0.61
RTN1-201ENST00000267484 SAP30BPQ9UHR5 308 aaKnown RBP18.86■□□□□ 0.61
RTN1-201ENST00000267484 DMGDHQ9UI17 866 aaKnown RBP18.86■□□□□ 0.61
RTN1-201ENST00000267484 STXBP3O00186 592 aa18.85■□□□□ 0.61
RTN1-201ENST00000267484 KIF5AQ12840 1032 aa18.85■□□□□ 0.61
RTN1-201ENST00000267484 SECISBP2LQ93073 1101 aaKnown RBP18.85■□□□□ 0.61
RTN1-201ENST00000267484 CRACR2AQ9BSW2 395 aa18.85■□□□□ 0.61
RTN1-201ENST00000267484 NCK2O43639 380 aa18.85■□□□□ 0.61
RTN1-201ENST00000267484 CCNE1P24864 410 aa18.85■□□□□ 0.61
RTN1-201ENST00000267484 CCNI2Q6ZMN8 369 aaPredicted RBP18.85■□□□□ 0.61
RTN1-201ENST00000267484 LRRC1Q9BTT6 524 aa18.85■□□□□ 0.61
RTN1-201ENST00000267484 EIF3CLB5ME19 914 aaKnown RBP18.84■□□□□ 0.61
RTN1-201ENST00000267484 TUBBP07437 444 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 TTC19Q6DKK2 380 aaPredicted RBP18.84■□□□□ 0.61
RTN1-201ENST00000267484 NFRKBQ6P4R8 1299 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 DZIP1Q86YF9 867 aaKnown RBP18.84■□□□□ 0.61
RTN1-201ENST00000267484 KIAA0895Q8NCT3 520 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 SH3RF3Q8TEJ3 882 aaPredicted RBP18.84■□□□□ 0.61
RTN1-201ENST00000267484 EIF3CQ99613 913 aaKnown RBP18.84■□□□□ 0.61
RTN1-201ENST00000267484 CCSER1Q9C0I3 900 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 TSPYL1Q9H0U9 437 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 SEMA6BQ9H3T3 888 aa18.84■□□□□ 0.61
RTN1-201ENST00000267484 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms