RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 HEXIM1O94992 359 aaKnown RBP12.75□□□□□ -0.37
VPS33A-201ENST00000267199 IFNAR2P48551 515 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 TCP11Q8WWU5 503 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 TUBGCP2Q9BSJ2 902 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 VEZTQ9HBM0 779 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 MTUS1Q9ULD2 1270 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 NDUFA10O95299 355 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 SLC39A2Q9NP94 309 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 ODF2LQ9ULJ1 636 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 ADAMTS13Q76LX8 1427 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 PXDNLA1KZ92 1463 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 PPLO60437 1756 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 OR52Z1P0C646 297 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 PTPREP23469 700 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 RESP18Q5W5W9 173 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 MMS22LQ6ZRQ5 1243 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 TRIM7Q9C029 511 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 STIM2Q9P246 746 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 FAM169AQ9Y6X4 670 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 NEDD4P46934 1319 aa12.75□□□□□ -0.37
VPS33A-201ENST00000267199 KIF28PB7ZC32 967 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 ADGRB2O60241 1585 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 LONP1P36776 959 aaKnown RBP12.74□□□□□ -0.37
VPS33A-201ENST00000267199 TRAF1Q13077 416 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 KRIT1O00522 736 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 TEX33O43247 280 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 ABCB4P21439 1286 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 NNTQ13423 1086 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 SNCBQ16143 134 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 ATP8A2Q9NTI2 1148 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 MYO1AQ9UBC5 1043 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 MYOM1P52179 1685 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 CLTCQ00610 1675 aaKnown RBP12.74□□□□□ -0.37
VPS33A-201ENST00000267199 FOXN1O15353 648 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 RGS16O15492 202 aaPredicted RBP12.74□□□□□ -0.37
VPS33A-201ENST00000267199 MFAP3LO75121 409 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 SEL1L2Q5TEA6 688 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 SRLQ86TD4 932 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 TSKSQ9UJT2 592 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 CEMIPQ8WUJ3 1361 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 TNFAIP3P21580 790 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 HMGB2P26583 209 aaKnown RBP12.74□□□□□ -0.37
VPS33A-201ENST00000267199 SUSD4Q5VX71 490 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 KAZALD1Q96I82 304 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 LSM14BQ9BX40 385 aaKnown RBP12.74□□□□□ -0.37
VPS33A-201ENST00000267199 ASIC3Q9UHC3 531 aa12.74□□□□□ -0.37
VPS33A-201ENST00000267199 PCP11498 1178 aaKnown RBP12.73□□□□□ -0.37
VPS33A-201ENST00000267199 NEK8Q86SG6 692 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 LMNTD2Q8IXW0 634 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 PPFIBP2Q8ND30 876 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 PANX2Q96RD6 677 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 A0A0G2JLW4 131 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 GGCXP38435 758 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 VSNL1P62760 191 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 MFSD14BQ5SR56 506 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 DENND2CQ68D51 928 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 ARHGEF2Q92974 986 aaKnown RBP12.73□□□□□ -0.37
VPS33A-201ENST00000267199 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 POLD4Q9HCU8 107 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 HDAC6Q9UBN7 1215 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 FEZ2Q9UHY8 353 aaPredicted RBP12.73□□□□□ -0.37
VPS33A-201ENST00000267199 CHMP2AO43633 222 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 PLEKHA8P1O95397 391 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 ALDH3A1P30838 453 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 SLC1A4P43007 532 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 TRAPPC10P48553 1259 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 EPHB4P54760 987 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 VWA3BQ502W6 1294 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 CNOT6LQ96LI5 555 aaKnown RBP12.73□□□□□ -0.37
VPS33A-201ENST00000267199 MRFAP1Q9Y605 127 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 DEPDC5O75140 1603 aa12.73□□□□□ -0.37
VPS33A-201ENST00000267199 MOCS3O95396 460 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 ZNF131P52739 623 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 KCNQ4P56696 695 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 POLR2FP61218 127 aaKnown RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 MTMR3Q13615 1198 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 HAUS3Q68CZ6 603 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 SHC4Q6S5L8 630 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 FMNL3Q8IVF7 1028 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 PAGE5Q96GU1 130 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 CEP63Q96MT8 703 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 CTTNBP2NLQ9P2B4 639 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 CEP170BQ9Y4F5 1589 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 USP32Q8NFA0 1604 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 EPB41P11171 864 aaKnown RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 PDIA6Q15084 440 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 KRT31Q15323 416 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 UAP1Q16222 522 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 CCDC105Q8IYK2 499 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 STMN2Q93045 179 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 BICD1Q96G01 975 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 SMC6Q96SB8 1091 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 SPATA31A3Q5VYP0 1347 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 ERVV-1B6SEH8 477 aa12.72□□□□□ -0.37
VPS33A-201ENST00000267199 N4BP2L2Q92802 583 aaPredicted RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 NAP1L4Q99733 375 aaKnown RBP12.72□□□□□ -0.37
VPS33A-201ENST00000267199 LY9Q9HBG7 655 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms