RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ZNF543Q08ER8 600 aa16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 LRCH2Q5VUJ6 765 aa16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 ZFP91Q96JP5 570 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 DEFB129Q9H1M3 183 aa16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 TMEM260Q9NX78 707 aa16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 NDUFB10O96000 172 aa16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 RPL13P26373 211 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 SLF1Q9BQI6 1058 aa16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 TEKT3Q9BXF9 490 aa16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 STRCQ7RTU9 1775 aa16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 LMNB1P20700 586 aa16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 NELFBQ8WX92 580 aa16.17■□□□□ 0.18
PDLIM2-201ENST00000265810 GTPBP6O43824 516 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 DACT2Q5SW24 774 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 TMX1Q9H3N1 280 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 NYAP2Q9P242 653 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 SPDYE2BA6NHP3 402 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 SPDYE6P0CI01 402 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 PDHBP11177 359 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 SPZ1Q9BXG8 430 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 AZI2Q9H6S1 392 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 RAVER2Q9HCJ3 691 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 KCTD2Q14681 263 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 LONRF3Q496Y0 759 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 C15orf52Q6ZUT6 534 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 ZNF577Q9BSK1 485 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 FEM1BQ9UK73 627 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 DDTLA6NHG4 134 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 AKR1B10O60218 316 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 PTPREP23469 700 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 SMTNP53814 917 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 AK8Q96MA6 479 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 CAMKK2Q96RR4 588 aa16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 NOC4LQ9BVI4 516 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-201ENST00000265810 KIF5CO60282 957 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 EIF2AK2P19525 551 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 NBPF9Q3BBW0 867 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 DCAF17Q5H9S7 520 aaPredicted RBP16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 MRPL44Q9H9J2 332 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 MLXIPQ9HAP2 919 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 TNNT1P13805 278 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 TBC1D8BQ0IIM8 1120 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 USP37Q86T82 979 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 GLG1Q92896 1179 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 HACL1Q9UJ83 578 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 UBE2Q2LH0YL09 131 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 GCNT3O95395 438 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 PRPF38AQ8NAV1 312 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 PCDHA6Q9UN73 950 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 PCDHA8Q9Y5H6 950 aa16.15■□□□□ 0.18
PDLIM2-201ENST00000265810 SLFN14P0C7P3 912 aa16.14■□□□□ 0.18
PDLIM2-201ENST00000265810 OSBPP22059 807 aa16.14■□□□□ 0.18
PDLIM2-201ENST00000265810 TIGD1Q96MW7 591 aa16.14■□□□□ 0.18
PDLIM2-201ENST00000265810 CCDC181Q5TID7 509 aa16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 OTUD5Q96G74 571 aa16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 CD2APQ9Y5K6 639 aa16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 FAM205CA6NFA0 338 aa16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 CETN3O15182 167 aa16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 RPN1P04843 607 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 ARL6IP4Q66PJ3 421 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 FAM163AQ96GL9 167 aaPredicted RBP16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 MRVI1Q9Y6F6 885 aa16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 ZNF75DP51815 510 aa16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 HMGCS2P54868 508 aa16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 ARID5AQ03989 594 aa16.14■□□□□ 0.17
PDLIM2-201ENST00000265810 STRCP1A6NGW2 1772 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 USO1O60763 962 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 APOBEC3HQ6NTF7 200 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 CLEC17AQ6ZS10 378 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 CERS5Q8N5B7 392 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 KIF18AQ8NI77 898 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 LARP4BQ92615 738 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 FAM212AQ96EL1 285 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 IFT74Q96LB3 600 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 SLC39A2Q9NP94 309 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 IQCA1LA6NCM1 817 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 KIF2AO00139 706 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 MTMR2Q13614 643 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 SRRTQ9BXP5 876 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 DDX4Q9NQI0 724 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 TAB2Q9NYJ8 693 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 ZKSCAN5Q9Y2L8 839 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 PHACTR2O75167 634 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 SEC23AQ15436 765 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 DPCR1Q3MIW9 517 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 TRIML1Q8N9V2 468 aa16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 ARGLU1Q9NWB6 273 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-201ENST00000265810 POTEB2H3BUK9 544 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 URI1O94763 535 aaPredicted RBP16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 HARSP12081 509 aaKnown RBP16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 AP3B2Q13367 1082 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 GINS2Q9Y248 185 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 FRMD4BQ9Y2L6 1034 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 RNF207Q6ZRF8 634 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 EEF2KMTQ96G04 330 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 HOXC10Q9NYD6 342 aa16.12■□□□□ 0.17
PDLIM2-201ENST00000265810 XKR9Q5GH70 373 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms