RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ZSCAN29Q8IWY8 852 aaPredicted RBP12.58□□□□□ -0.4
MSH3-201ENST00000265081 DNAJC18Q9H819 358 aa12.58□□□□□ -0.4
MSH3-201ENST00000265081 STX8Q9UNK0 236 aa12.58□□□□□ -0.4
MSH3-201ENST00000265081 GOLGA8HP0CJ92 632 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 CDC42EP5Q6NZY7 148 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 DUSP9Q99956 384 aaKnown RBP12.57□□□□□ -0.4
MSH3-201ENST00000265081 TRIM9Q9C026 710 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 ADGRG1Q9Y653 693 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 ABCB11O95342 1321 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 PP2D1A8MPX8 630 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 NPHP1O15259 732 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 NAPAP54920 295 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 ADKP55263 362 aaKnown RBP12.57□□□□□ -0.4
MSH3-201ENST00000265081 SLC4A8Q2Y0W8 1093 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 RRAGBQ5VZM2 374 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 TATDN1Q6P1N9 297 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 RAD9BQ6WBX8 426 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 CNGA4Q8IV77 575 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 MASTLQ96GX5 879 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 DNAJC7Q99615 494 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 JMJD4Q9H9V9 463 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 SYNPO2Q9UMS6 1093 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 PNMA6FA0A0J9YX94 578 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 PDE6BP35913 854 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 GTF2IP78347 998 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 STYK1Q6J9G0 422 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 KCNJ18B7U540 433 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 CDK11BP21127 795 aaKnown RBP12.57□□□□□ -0.4
MSH3-201ENST00000265081 PMS1P54277 932 aaKnown RBP12.57□□□□□ -0.4
MSH3-201ENST00000265081 KCNJ12Q14500 433 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 STK17AQ9UEE5 414 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 GDAQ9Y2T3 454 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 MRFAP1Q9Y605 127 aa12.57□□□□□ -0.4
MSH3-201ENST00000265081 PLCG1P19174 1290 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 GRB10Q13322 594 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 ZNF397Q8NF99 534 aaPredicted RBP12.56□□□□□ -0.4
MSH3-201ENST00000265081 ABHD10Q9NUJ1 306 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 BLOC1S4Q9NUP1 217 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 SERPINB13Q9UIV8 391 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 CYP3A7-CYP3A51PA0A087WV96 503 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 LGALS16A8MUM7 142 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 CYP3A7P24462 503 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 FXR1P51114 621 aaKnown RBP eCLIP12.56□□□□□ -0.4
MSH3-201ENST00000265081 PODNQ7Z5L7 613 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 CABP7Q86V35 215 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 TEX2Q8IWB9 1127 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 REXO1Q8N1G1 1221 aaKnown RBP12.56□□□□□ -0.4
MSH3-201ENST00000265081 TBCKQ8TEA7 893 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 PNMA5Q96PV4 448 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 DDX41Q9UJV9 622 aaKnown RBP12.56□□□□□ -0.4
MSH3-201ENST00000265081 TADA3O75528 432 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 TRIM37O94972 964 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 NAA30Q147X3 362 aaPredicted RBP12.56□□□□□ -0.4
MSH3-201ENST00000265081 MEA1Q16626 185 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 PTPN21Q16825 1174 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 GPATCH4Q5T3I0 446 aaKnown RBP12.56□□□□□ -0.4
MSH3-201ENST00000265081 C7orf43Q8WVR3 580 aa12.56□□□□□ -0.4
MSH3-201ENST00000265081 MRPL44Q9H9J2 332 aaKnown RBP12.56□□□□□ -0.4
MSH3-201ENST00000265081 SEC63Q9UGP8 760 aaKnown RBP12.56□□□□□ -0.4
MSH3-201ENST00000265081 MMP14P50281 582 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 RSRC2Q7L4I2 434 aaKnown RBP12.55□□□□□ -0.4
MSH3-201ENST00000265081 LRRN4CLQ8ND94 238 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 RASSF10A6NK89 507 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 RNF225M0QZC1 329 aaPredicted RBP12.55□□□□□ -0.4
MSH3-201ENST00000265081 FIGNQ5HY92 759 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 CCDC17Q96LX7 622 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 PVALEFA0A1B0GWK0 134 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 CCNT1O60563 726 aaKnown RBP12.55□□□□□ -0.4
MSH3-201ENST00000265081 STX17P56962 302 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 ERVK-24P63145 666 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 FILIP1LQ4L180 1135 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 ADGRF4Q8IZF3 695 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 STAMQ92783 540 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 CPVLQ9H3G5 476 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 NYAP2Q9P242 653 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 LOXHD1Q8IVV2 1947 aa12.55□□□□□ -0.4
MSH3-201ENST00000265081 SOWAHDA6NJG2 315 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 CDC25AP30304 524 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 ADCY7P51828 1080 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 DACT2Q5SW24 774 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 STRIP1Q5VSL9 837 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 MOXD1Q6UVY6 613 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 WDR24Q96S15 920 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 A0A1W2PQJ5 194 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 SLC37A4O43826 429 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 CASP14P31944 242 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 ZC3H3Q8IXZ2 948 aaKnown RBP12.54□□□□□ -0.4
MSH3-201ENST00000265081 MB21D1Q8N884 522 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 DCAF4Q8WV16 495 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 DHX36Q9H2U1 1008 aaKnown RBP12.54□□□□□ -0.4
MSH3-201ENST00000265081 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 CCNE1P24864 410 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 CDK17Q00537 523 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 HSP90AA4PQ58FG1 418 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 CENPPQ6IPU0 288 aa12.54□□□□□ -0.4
MSH3-201ENST00000265081 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms