RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TSR1Q2NL82 804 aaKnown RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 NOC3LQ8WTT2 800 aaKnown RBP10.51□□□□□ -0.73
SSR3-201ENST00000265044 AS3MTQ9HBK9 375 aa10.51□□□□□ -0.73
SSR3-201ENST00000265044 CASP1P29466 404 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 UBASH3AP57075 661 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 FUT2Q10981 343 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 TRMT44Q8IYL2 757 aaKnown RBP10.5□□□□□ -0.73
SSR3-201ENST00000265044 ERMNQ8TAM6 284 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
SSR3-201ENST00000265044 RMND1Q9NWS8 449 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 FBXO2Q9UK22 296 aaPredicted RBP10.5□□□□□ -0.73
SSR3-201ENST00000265044 GCOM1H8Y6P7 765 aaPredicted RBP10.5□□□□□ -0.73
SSR3-201ENST00000265044 POLR2MP0CAP2 368 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 MYL5Q02045 173 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 SNW1Q13573 536 aaKnown RBP10.5□□□□□ -0.73
SSR3-201ENST00000265044 NCAPH2Q6IBW4 605 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 TYW1BQ6NUM6 668 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 CCDC186Q7Z3E2 898 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 TMC6Q7Z403 805 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 MRPL11Q9Y3B7 192 aaKnown RBP10.5□□□□□ -0.73
SSR3-201ENST00000265044 DDNO94850 711 aaPredicted RBP10.5□□□□□ -0.73
SSR3-201ENST00000265044 MYCLP12524 364 aaPredicted RBP10.5□□□□□ -0.73
SSR3-201ENST00000265044 SH3BP5LQ7L8J4 393 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 DYMQ7RTS9 669 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 ZNF592Q92610 1267 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 TIGD1Q96MW7 591 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 IFNKQ9P0W0 207 aa10.5□□□□□ -0.73
SSR3-201ENST00000265044 PP2D1A8MPX8 630 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 NFKBIEO00221 500 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 FOXN1O15353 648 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 ECM2O94769 699 aaPredicted RBP10.49□□□□□ -0.73
SSR3-201ENST00000265044 KCNA3P22001 575 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 CAP2P40123 477 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 NBPF12Q5TAG4 269 aaPredicted RBP10.49□□□□□ -0.73
SSR3-201ENST00000265044 SV2BQ7L1I2 683 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 NAP1L4Q99733 375 aaKnown RBP10.49□□□□□ -0.73
SSR3-201ENST00000265044 TDP2O95551 362 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 ATP2C1P98194 919 aaPredicted RBP10.49□□□□□ -0.73
SSR3-201ENST00000265044 RAD51AP2Q09MP3 1159 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 CDAN1Q8IWY9 1227 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 ANO3Q9BYT9 981 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 FBXO28Q9NVF7 368 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 ROBO3Q96MS0 1386 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 C4AP0C0L4 1744 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 DDX39AO00148 427 aaKnown RBP10.49□□□□□ -0.73
SSR3-201ENST00000265044 SLFN14P0C7P3 912 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 SP4Q02446 784 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 ARL6IP4Q66PJ3 421 aaKnown RBP10.49□□□□□ -0.73
SSR3-201ENST00000265044 FAM83AQ86UY5 434 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 APOBEC3FQ8IUX4 373 aaKnown RBP10.49□□□□□ -0.73
SSR3-201ENST00000265044 ENGASEQ8NFI3 743 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 TRIM47Q96LD4 638 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 RIOX1Q9H6W3 641 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 PRR12Q9ULL5 1215 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 TUBGCP6Q96RT7 1819 aa10.49□□□□□ -0.73
SSR3-201ENST00000265044 SMARCA1P28370 1054 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 POTEDQ86YR6 584 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 ZNF579Q8NAF0 562 aaKnown RBP10.48□□□□□ -0.73
SSR3-201ENST00000265044 MLKLQ8NB16 471 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 CPLX3Q8WVH0 158 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 DNAJC18Q9H819 358 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 VCPKMTQ9H867 229 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 FZD1Q9UP38 647 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 NFE2L3Q9Y4A8 694 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 LAD1O00515 517 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 FOSP01100 380 aaPredicted RBP10.48□□□□□ -0.73
SSR3-201ENST00000265044 INPP5BP32019 993 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 EPS15P42566 896 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 PDE4DQ08499 809 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 SMYD4Q8IYR2 804 aaPredicted RBP10.48□□□□□ -0.73
SSR3-201ENST00000265044 ZKSCAN4Q969J2 545 aaPredicted RBP10.48□□□□□ -0.73
SSR3-201ENST00000265044 PSMA7O14818 248 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 SFPQP23246 707 aaKnown RBP eCLIP10.48□□□□□ -0.73
SSR3-201ENST00000265044 MTMR2Q13614 643 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 FAM160B2Q86V87 743 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 PPFIBP1Q86W92 1011 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 TMEM60Q9H2L4 133 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 CCDC88AQ3V6T2 1871 aa10.48□□□□□ -0.73
SSR3-201ENST00000265044 USP14P54578 494 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 KRT26Q7Z3Y9 468 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 RIC8AQ9NPQ8 531 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 RREB1Q92766 1687 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 POTEMA6NI47 508 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 GADL1Q6ZQY3 521 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 DPF2Q92785 391 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 GOLGB1Q14789 3259 aaKnown RBP10.47□□□□□ -0.73
SSR3-201ENST00000265044 COBLO75128 1261 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 PRKCSHP14314 528 aaPredicted RBP10.47□□□□□ -0.73
SSR3-201ENST00000265044 TAL1P17542 331 aaPredicted RBP10.47□□□□□ -0.73
SSR3-201ENST00000265044 HMGCS2P54868 508 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 CYP4A11Q02928 519 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 RGS22Q8NE09 1264 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 PAGR1Q9BTK6 254 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 LRRC27Q9C0I9 530 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 RAVER2Q9HCJ3 691 aaKnown RBP10.47□□□□□ -0.73
SSR3-201ENST00000265044 CTNND2Q9UQB3 1225 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 ZNF831Q5JPB2 1677 aa10.47□□□□□ -0.73
SSR3-201ENST00000265044 SLX4Q8IY92 1834 aa10.46□□□□□ -0.73
SSR3-201ENST00000265044 N4BP3O15049 544 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms