RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 TMEM63CQ9P1W3 806 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 GAKO14976 1311 aa8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 MYO5AQ9Y4I1 1855 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-201ENST00000264640 GOLGA6L4A6NEF3 574 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 FAM86C2PA6NEL3 165 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 MSCO60682 206 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 PTMAP06454 111 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 TPM3P06753 285 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 TPM2P07951 284 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 CYBAP13498 195 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 RPS6KB1P23443 525 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 CAP2P40123 477 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 PHKA1P46020 1223 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 KCNQ1P51787 676 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 JAG1P78504 1218 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 ATP2B2Q01814 1243 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 TLE2Q04725 743 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 SNX17Q15036 470 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 MCMDC2Q4G0Z9 681 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 MICALL1Q8N3F8 863 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 NPLOC4Q8TAT6 608 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 EDC3Q96F86 508 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 PDLIM2Q96JY6 352 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 HAUS7Q99871 368 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 SCAND2PQ9GZW5 306 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 RBSNQ9H1K0 784 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 AKAP2Q9Y2D5 859 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 TRANK1O15050 2925 aa8.18□□□□□ -1.1
SMARCE1-201ENST00000264640 MYH1P12882 1939 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 VPS37CA5D8V6 355 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 PQBP1O60828 265 aaKnown RBP8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 CNMDO75829 334 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 CIAO1O76071 339 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 CLTBP09497 229 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 RAG1P15918 1043 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 HOXA7P31268 230 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 RFX5P48382 616 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 BACE1P56817 501 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 COPS2P61201 443 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 FGD1P98174 961 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 FPGSQ05932 587 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 TFCP2Q12800 502 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 AKNAD1Q5T1N1 836 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 CCDC129Q6ZRS4 1044 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 ARRDC4Q8NCT1 418 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 LPIN2Q92539 896 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 SNX27Q96L92 541 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 PBX4Q9BYU1 374 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 IL25Q9H293 177 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 AS3MTQ9HBK9 375 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 ABCF2Q9UG63 623 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 MROH7-TTC4A0A0A0MT08 1334 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 ELP1O95163 1332 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 SALL1Q9NSC2 1324 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 A0A0G2JMZ2 1700 aa8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 COL11A1P12107 1806 aaPredicted RBP8.17□□□□□ -1.1
SMARCE1-201ENST00000264640 A0A0D9SFI3 127 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 GDF11O95390 407 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 ZFYP08048 801 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 MYH7P12883 1935 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 BMP1P13497 986 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 ADORA1P30542 326 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 TERF1P54274 439 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 RHBDL3P58872 404 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 HMGN5P82970 282 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 ZYXQ15942 572 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 FAM47AQ5JRC9 791 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 PRRC2BQ5JSZ5 2229 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 GORABQ5T7V8 394 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 KBTBD3Q8NAB2 608 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 FAM227BQ96M60 508 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 NEK1Q96PY6 1258 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 DNAJC2Q99543 621 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 LLPHQ9BRT6 129 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 ZSCAN16Q9H4T2 348 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 CEP126Q9P2H0 1117 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 CTNNA3Q9UI47 895 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 NOL7Q9UMY1 257 aaKnown RBP8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 MTMR6Q9Y217 621 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 CNPY2Q9Y2B0 182 aa8.16□□□□□ -1.1
SMARCE1-201ENST00000264640 PARP14Q460N5 1801 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 SLC15A5A6NIM6 579 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 GOLGA6L6A8MZA4 724 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 H3BQV1 296 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 EYA2O00167 538 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 FIBPO43427 364 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 CCDC192P0DO97 292 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 RASGRF1Q13972 1273 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 GRB14Q14449 540 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 LRRC41Q15345 812 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 ATP2B3Q16720 1220 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 ME3Q16798 604 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 TMEM31Q5JXX7 168 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 CCDC158Q5M9N0 1113 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 PRAMEF19Q5SWL8 479 aa8.15□□□□□ -1.1
SMARCE1-201ENST00000264640 ATL3Q6DD88 541 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms