RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SMYD4Q8IYR2 804 aaPredicted RBP18.49■□□□□ 0.55
PHRF1-201ENST00000264555 ZNF579Q8NAF0 562 aaKnown RBP18.49■□□□□ 0.55
PHRF1-201ENST00000264555 METTL14Q9HCE5 456 aaKnown RBP18.49■□□□□ 0.55
PHRF1-201ENST00000264555 CTTNBP2NLQ9P2B4 639 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 ADAM9Q13443 819 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 USP17L2Q6R6M4 530 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 MCF2L2Q86YR7 1114 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 UBLCP1Q8WVY7 318 aaPredicted RBP18.49■□□□□ 0.55
PHRF1-201ENST00000264555 STK17AQ9UEE5 414 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 KIAA1024Q9UPX6 916 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 CD163L1Q9NR16 1453 aa18.49■□□□□ 0.55
PHRF1-201ENST00000264555 EBAG9O00559 213 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 ACTN4O43707 911 aaKnown RBP18.48■□□□□ 0.55
PHRF1-201ENST00000264555 CLUL1Q15846 466 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 P2RX5Q93086 422 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 ZBTB9Q96C00 473 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 EPSTI1Q96J88 318 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 COA1Q9GZY4 146 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 ITSN1Q15811 1721 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 LIN9Q5TKA1 542 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 STOX1Q6ZVD7 989 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 OTUD6AQ7L8S5 288 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 PLA2G4DQ86XP0 818 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 VSTM4Q8IW00 320 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 INCENPQ9NQS7 918 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 UTP11Q9Y3A2 253 aaKnown RBP18.48■□□□□ 0.55
PHRF1-201ENST00000264555 GSG1L2A8MUP6 293 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 KRT26Q7Z3Y9 468 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 PSMB7Q99436 277 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 STAT1P42224 750 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 BAG6P46379 1132 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 GABPB1Q06547 395 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-201ENST00000264555 KRT27Q7Z3Y8 459 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 SGMS1Q86VZ5 419 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 CELF1Q92879 486 aaKnown RBP18.48■□□□□ 0.55
PHRF1-201ENST00000264555 ZMYND15Q9H091 742 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 AS3MTQ9HBK9 375 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 DNAJC21Q5F1R6 531 aaKnown RBP18.48■□□□□ 0.55
PHRF1-201ENST00000264555 DPH6Q7L8W6 267 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 PEX26Q7Z412 305 aa18.48■□□□□ 0.55
PHRF1-201ENST00000264555 FMR1NBQ8N0W7 255 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-201ENST00000264555 ZNF609O15014 1411 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 PRDX5P30044 214 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 GBP6Q6ZN66 633 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 KCTD1Q719H9 257 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 AFAP1L1Q8TED9 768 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 TLDC2A0PJX2 215 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 ZEB2O60315 1214 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 IGSF3O75054 1194 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 RETREG2Q8NC44 543 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 TEKT3Q9BXF9 490 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 PLEKHG2Q9H7P9 1386 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 CSF1RP07333 972 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 RBL2Q08999 1139 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 TBC1D9BQ66K14 1250 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 APBB1IPQ7Z5R6 666 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-201ENST00000264555 GOLPH3LQ9H4A5 285 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 PNPLA7Q6ZV29 1317 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 CEP170BQ9Y4F5 1589 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-201ENST00000264555 CCDC25Q86WR0 208 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 CCDC114Q96M63 670 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 CSRNP1Q96S65 589 aa18.47■□□□□ 0.55
PHRF1-201ENST00000264555 SAMSN1Q9NSI8 373 aaKnown RBP18.47■□□□□ 0.55
PHRF1-201ENST00000264555 ALAS1P13196 640 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 PAXIP1Q6ZW49 1069 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-201ENST00000264555 ENAHQ8N8S7 591 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-201ENST00000264555 SH3RF3Q8TEJ3 882 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-201ENST00000264555 LRRC45Q96CN5 670 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 SELENOSQ9BQE4 189 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 CDC27P30260 824 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 CC2D2BQ6DHV5 1058 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 SEPT12Q8IYM1 358 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 DBNDD1Q9H9R9 158 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 RIC8AQ9NPQ8 531 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 CYP2J2P51589 502 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 PAK2Q13177 524 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 FAM178BQ8IXR5 827 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 DHX37Q8IY37 1157 aaKnown RBP18.46■□□□□ 0.55
PHRF1-201ENST00000264555 NOP56O00567 594 aaKnown RBP18.46■□□□□ 0.55
PHRF1-201ENST00000264555 COBLO75128 1261 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 NPR1P16066 1061 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 CDAN1Q8IWY9 1227 aa18.46■□□□□ 0.55
PHRF1-201ENST00000264555 DCP1AQ9NPI6 582 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-201ENST00000264555 CDC25AP30304 524 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 TRPC3Q13507 836 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 RDH13Q8NBN7 331 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 COA7Q96BR5 231 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 AZI2Q9H6S1 392 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 PI4KBQ9UBF8 816 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 HOXA7P31268 230 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-201ENST00000264555 RFX5P48382 616 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-201ENST00000264555 PFKFB3Q16875 520 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-201ENST00000264555 ANKS4BQ8N8V4 417 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 ZFP91Q96JP5 570 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-201ENST00000264555 LARSQ9P2J5 1176 aaKnown RBP18.45■□□□□ 0.54
PHRF1-201ENST00000264555 RABGAP1Q9Y3P9 1069 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 HYOU1Q9Y4L1 999 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 POLR2FP61218 127 aaKnown RBP18.45■□□□□ 0.54
PHRF1-201ENST00000264555 ARHGAP44Q17R89 818 aa18.45■□□□□ 0.54
PHRF1-201ENST00000264555 ZNF512BQ96KM6 892 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms