RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 PHF20Q9BVI0 1012 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 GBP3Q9H0R5 595 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 KANSL2Q9H9L4 492 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 DDX25Q9UHL0 483 aaKnown RBP13.99□□□□□ -0.17
HERC6-201ENST00000264346 USP17L15C9J2P7 530 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 USP17L13C9JLJ4 530 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 USP17L11C9JVI0 530 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 USP17L18D6R9N7 530 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 USP17L22D6RA61 530 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 USP17L17D6RBQ6 530 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 USP17L19D6RCP7 530 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 IRX3P78415 501 aaPredicted RBP13.99□□□□□ -0.17
HERC6-201ENST00000264346 MRPS25P82663 173 aaKnown RBP13.99□□□□□ -0.17
HERC6-201ENST00000264346 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 SLFN13Q68D06 897 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 USP17L6PQ6QN14 398 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 SLC51AQ86UW1 340 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 CCDC65Q8IXS2 484 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 TMEM60Q9H2L4 133 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 VPS18Q9P253 973 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 EPN1Q9Y6I3 576 aaPredicted RBP13.99□□□□□ -0.17
HERC6-201ENST00000264346 AFF2P51816 1311 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 H7C1D1 291 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 BBOX1O75936 387 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 TRAPPC10P48553 1259 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 WDR78Q5VTH9 848 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 IQCEQ6IPM2 695 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 RABEP2Q9H5N1 569 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 TUBE1Q9UJT0 475 aa13.99□□□□□ -0.17
HERC6-201ENST00000264346 DDX41Q9UJV9 622 aaKnown RBP13.99□□□□□ -0.17
HERC6-201ENST00000264346 RGPD1P0DJD0 1748 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 ICA1Q05084 483 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 TTBK2Q6IQ55 1244 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 LRRC27Q9C0I9 530 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 FAM13AO94988 1023 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 AKR1B1P15121 316 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 SSR1P43307 286 aaKnown RBP13.98□□□□□ -0.17
HERC6-201ENST00000264346 ZNF658Q5TYW1 1059 aaPredicted RBP13.98□□□□□ -0.17
HERC6-201ENST00000264346 GPBP1Q86WP2 473 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 LARGE2Q8N3Y3 721 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 SMCR8Q8TEV9 937 aaPredicted RBP13.98□□□□□ -0.17
HERC6-201ENST00000264346 WDR24Q96S15 920 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 MAGEA1P43355 309 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 PABPC4Q13310 644 aaKnown RBP eCLIP13.98□□□□□ -0.17
HERC6-201ENST00000264346 GRIK5Q16478 980 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 SLIT3O75094 1523 aa13.98□□□□□ -0.17
HERC6-201ENST00000264346 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
HERC6-201ENST00000264346 TDP2O95551 362 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 TUBB4AP04350 444 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 TPH2Q8IWU9 490 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 IFT81Q8WYA0 676 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 BCCIPQ9P287 314 aaKnown RBP eCLIP13.97□□□□□ -0.17
HERC6-201ENST00000264346 TRPC5Q9UL62 973 aaPredicted RBP13.97□□□□□ -0.17
HERC6-201ENST00000264346 HOXA13P31271 388 aaPredicted RBP13.97□□□□□ -0.17
HERC6-201ENST00000264346 GABPB1Q06547 395 aaPredicted RBP13.97□□□□□ -0.17
HERC6-201ENST00000264346 SEC23AQ15436 765 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 ODF2Q5BJF6 829 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
HERC6-201ENST00000264346 SCAF8Q9UPN6 1271 aaKnown RBP13.97□□□□□ -0.17
HERC6-201ENST00000264346 BUB1O43683 1085 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 RAD17O75943 681 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 TTLL1O95922 423 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 FCER1AP12319 257 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 ATP2C1P98194 919 aaPredicted RBP13.97□□□□□ -0.17
HERC6-201ENST00000264346 PRKG1Q13976 671 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 NCAPHQ15003 741 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 VPS36Q86VN1 386 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.97□□□□□ -0.17
HERC6-201ENST00000264346 CNTNAP5Q8WYK1 1306 aa13.97□□□□□ -0.17
HERC6-201ENST00000264346 RGPD5Q99666 1765 aa13.96□□□□□ -0.17
HERC6-201ENST00000264346 ACTN4O43707 911 aaKnown RBP13.96□□□□□ -0.17
HERC6-201ENST00000264346 ORC4O43929 436 aa13.96□□□□□ -0.17
HERC6-201ENST00000264346 SLURP2P0DP57 97 aa13.96□□□□□ -0.17
HERC6-201ENST00000264346 ANKRD7Q92527 254 aa13.96□□□□□ -0.17
HERC6-201ENST00000264346 LARP4BQ92615 738 aaKnown RBP13.96□□□□□ -0.17
HERC6-201ENST00000264346 BPIFA3Q9BQP9 254 aa13.96□□□□□ -0.17
HERC6-201ENST00000264346 SORBS3O60504 671 aa13.96□□□□□ -0.17
HERC6-201ENST00000264346 ALDH1B1P30837 517 aa13.96□□□□□ -0.17
HERC6-201ENST00000264346 TNIP1Q15025 636 aa13.96□□□□□ -0.17
HERC6-201ENST00000264346 KRT27Q7Z3Y8 459 aa13.96□□□□□ -0.17
HERC6-201ENST00000264346 EHBP1Q8NDI1 1231 aa13.96□□□□□ -0.17
HERC6-201ENST00000264346 CHD2O14647 1828 aaKnown RBP13.96□□□□□ -0.18
HERC6-201ENST00000264346 USP17L10C9JJH3 530 aa13.96□□□□□ -0.18
HERC6-201ENST00000264346 TRIM66O15016 1216 aa13.96□□□□□ -0.18
HERC6-201ENST00000264346 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.18
HERC6-201ENST00000264346 DNM2P50570 870 aa13.96□□□□□ -0.18
HERC6-201ENST00000264346 PKN1Q16512 942 aa13.96□□□□□ -0.18
HERC6-201ENST00000264346 MAP9Q49MG5 647 aa13.96□□□□□ -0.18
HERC6-201ENST00000264346 TCP11X2Q5H9J9 407 aa13.96□□□□□ -0.18
HERC6-201ENST00000264346 GJD4Q96KN9 370 aaPredicted RBP13.96□□□□□ -0.18
HERC6-201ENST00000264346 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.18
HERC6-201ENST00000264346 HPSEQ9Y251 543 aa13.96□□□□□ -0.18
HERC6-201ENST00000264346 GCNT3O95395 438 aa13.95□□□□□ -0.18
HERC6-201ENST00000264346 CXCR5P32302 372 aa13.95□□□□□ -0.18
HERC6-201ENST00000264346 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
HERC6-201ENST00000264346 P2RX5Q93086 422 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms