RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 UBE2SQ16763 222 aa11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 FASTKD5Q7L8L6 764 aaKnown RBP11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 BLIDQ8IZY5 108 aa11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 FAM43AQ8N2R8 423 aa11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 REPS2Q8NFH8 660 aa11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 TBC1D5Q92609 795 aa11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 ZIC5Q96T25 663 aa11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 FTOQ9C0B1 505 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 ZMYND12Q9H0C1 365 aa11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 HOMER2Q9NSB8 354 aa11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 TMEM260Q9NX78 707 aa11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 BIN2Q9UBW5 565 aaPredicted RBP11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 PCDHA4Q9UN74 947 aa11.19□□□□□ -0.62
SNRNP40-201ENST00000263694 OPLAHO14841 1288 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 BAG4O95429 457 aaKnown RBP11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 ZBTB48P10074 688 aaPredicted RBP11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 ALAS1P13196 640 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.622e-16■■■■■ 38.1
SNRNP40-201ENST00000263694 IRX3P78415 501 aaPredicted RBP11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 PLS1Q14651 629 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 TMEM132BQ14DG7 1078 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 JAKMIP3Q5VZ66 844 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 USP17L6PQ6QN14 398 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 PAXIP1Q6ZW49 1069 aaPredicted RBP11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 NOSTRINQ8IVI9 506 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 CCDC148Q8NFR7 591 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 TNFRSF25Q93038 417 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 PGBD1Q96JS3 809 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 HOXC10Q9NYD6 342 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 BTBD7Q9P203 1132 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 CCPG1Q9ULG6 757 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 PCDHA6Q9UN73 950 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 ADAMTS5Q9UNA0 930 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 CNPY2Q9Y2B0 182 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 RIPK3Q9Y572 518 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 PCDHA8Q9Y5H6 950 aa11.18□□□□□ -0.62
SNRNP40-201ENST00000263694 FAM155AB1AL88 458 aaPredicted RBP11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 hCG_1984214I3L0E3 225 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 M0R2N6 131 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 PDHXO00330 501 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 ICAM1P05362 532 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 SLC10A3P09131 477 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 PDIA4P13667 645 aaKnown RBP11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 ATP2B1P20020 1258 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 ADCY7P51828 1080 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 CEBPZQ03701 1054 aaKnown RBP11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 NBR1Q14596 966 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 MUM1L1Q5H9M0 696 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 CYP4F22Q6NT55 531 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 ZNF713Q8N859 430 aaPredicted RBP11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 R3HDMLQ9H3Y0 253 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 ZSCAN16Q9H4T2 348 aaPredicted RBP11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 PSTPIP2Q9H939 334 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 C6orf50Q9HD87 102 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
SNRNP40-201ENST00000263694 WNT7AO00755 349 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 CNMDO75829 334 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 NCLP19338 710 aaKnown RBP11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 CALML3P27482 149 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 HOXA13P31271 388 aaPredicted RBP11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 TOB1P50616 345 aaPredicted RBP11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 HERVK_113P62684 666 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 HTRA3P83110 453 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 SNRNP48Q6IEG0 339 aaKnown RBP11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 PIK3AP1Q6ZUJ8 805 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 DAGLBQ8NCG7 672 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 CCDC12Q8WUD4 166 aaPredicted RBP11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 FOXP1Q9H334 677 aaPredicted RBP11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 TXNRD2Q9NNW7 524 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 ZNF214Q9UL59 606 aaPredicted RBP11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 ESYT2A0FGR8 921 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 IGF2BP3O00425 579 aaKnown RBP eCLIP11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 NFIBO00712 420 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 MEIS2O14770 477 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 CFBP00751 764 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 OSBPP22059 807 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 GNA11P29992 359 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 Q3C1V9 767 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 MYSM1Q5VVJ2 828 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 BRAPQ7Z569 592 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 RGS22Q8NE09 1264 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 CLEC4DQ8WXI8 215 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 CUL5Q93034 780 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 TRERF1Q96PN7 1200 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 BRMS1Q9HCU9 246 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 RBPJLQ9UBG7 517 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 CLIC4Q9Y696 253 aa11.16□□□□□ -0.62
SNRNP40-201ENST00000263694 A0A0G2JMZ2 1700 aa11.15□□□□□ -0.62
SNRNP40-201ENST00000263694 AOC2O75106 756 aa11.15□□□□□ -0.62
SNRNP40-201ENST00000263694 ABCB11O95342 1321 aa11.15□□□□□ -0.62
SNRNP40-201ENST00000263694 STAT3P40763 770 aa11.15□□□□□ -0.62
SNRNP40-201ENST00000263694 APLP1P51693 650 aa11.15□□□□□ -0.62
SNRNP40-201ENST00000263694 MRPL12P52815 198 aaKnown RBP11.15□□□□□ -0.62
SNRNP40-201ENST00000263694 PABPC4Q13310 644 aaKnown RBP eCLIP11.15□□□□□ -0.622e-12■■■■□ 21.4
SNRNP40-201ENST00000263694 INF2Q27J81 1249 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms