RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 PCDHA4Q9UN74 947 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 CALM1P0DP23 149 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 CALM2P0DP24 149 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 CALM3P0DP25 149 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 PDE4DQ08499 809 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 TBC1D8BQ0IIM8 1120 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 GOLGA5Q8TBA6 731 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 CAGE1Q8TC20 777 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 SH3RF3Q8TEJ3 882 aaPredicted RBP18.51■□□□□ 0.55
ZNF541-201ENST00000263351 CNOT6LQ96LI5 555 aaKnown RBP18.51■□□□□ 0.55
ZNF541-201ENST00000263351 CAPN11Q9UMQ6 739 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 EP400Q96L91 3159 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 PDS5AQ29RF7 1337 aaKnown RBP18.51■□□□□ 0.55
ZNF541-201ENST00000263351 H7C1D1 291 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 GGCXP38435 758 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 TECP42680 631 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 SPAG1Q07617 926 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 TTYH3Q9C0H2 523 aa18.51■□□□□ 0.55
ZNF541-201ENST00000263351 FAM170AA1A519 330 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 M0R2N6 131 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 PSMD14O00487 310 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 LONP1P36776 959 aaKnown RBP18.5■□□□□ 0.55
ZNF541-201ENST00000263351 PPP2R5BQ15173 497 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 MIIPQ5JXC2 388 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 SRLQ86TD4 932 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 CCDC148Q8NFR7 591 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 TMEM260Q9NX78 707 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 HPCAL4Q9UM19 191 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 IDEP14735 1019 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 ASIC1P78348 528 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 PARP10Q53GL7 1025 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 DYMQ7RTS9 669 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 AMIGO3Q86WK7 504 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 DMGDHQ9UI17 866 aaKnown RBP18.5■□□□□ 0.55
ZNF541-201ENST00000263351 SALL4Q9UJQ4 1053 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 FLT1P17948 1338 aa18.5■□□□□ 0.55
ZNF541-201ENST00000263351 ORC4O43929 436 aa18.49■□□□□ 0.55
ZNF541-201ENST00000263351 CCNT1O60563 726 aaKnown RBP18.49■□□□□ 0.55
ZNF541-201ENST00000263351 MOCS3O95396 460 aa18.49■□□□□ 0.55
ZNF541-201ENST00000263351 MTIF2P46199 727 aaKnown RBP18.49■□□□□ 0.55
ZNF541-201ENST00000263351 UBE4AQ14139 1066 aa18.49■□□□□ 0.55
ZNF541-201ENST00000263351 DNAJC21Q5F1R6 531 aaKnown RBP18.49■□□□□ 0.55
ZNF541-201ENST00000263351 CT47A1Q5JQC4 288 aaPredicted RBP18.49■□□□□ 0.55
ZNF541-201ENST00000263351 GIMAP8Q8ND71 665 aaPredicted RBP18.49■□□□□ 0.55
ZNF541-201ENST00000263351 CRNKL1Q9BZJ0 848 aaKnown RBP18.49■□□□□ 0.55
ZNF541-201ENST00000263351 BSDC1Q9NW68 430 aaPredicted RBP18.49■□□□□ 0.55
ZNF541-201ENST00000263351 LRRC41Q15345 812 aa18.49■□□□□ 0.55
ZNF541-201ENST00000263351 HSP90B2PQ58FF3 399 aa18.49■□□□□ 0.55
ZNF541-201ENST00000263351 NFRKBQ6P4R8 1299 aa18.49■□□□□ 0.55
ZNF541-201ENST00000263351 USP17L2Q6R6M4 530 aa18.49■□□□□ 0.55
ZNF541-201ENST00000263351 MAPKAPK5Q8IW41 473 aa18.49■□□□□ 0.55
ZNF541-201ENST00000263351 KIAA0895Q8NCT3 520 aa18.49■□□□□ 0.55
ZNF541-201ENST00000263351 EXOC1Q9NV70 894 aa18.49■□□□□ 0.55
ZNF541-201ENST00000263351 AGPSO00116 658 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 SRGNP10124 158 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 LEKR1Q6ZMV7 388 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 FBXO33Q7Z6M2 555 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 CLEC10AQ8IUN9 316 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 TGFBRAP1Q8WUH2 860 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 SEMA6BQ9H3T3 888 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 HAUS4Q9H6D7 363 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 KBTBD4Q9NVX7 518 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 RMND1Q9NWS8 449 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 STXBP3O00186 592 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 PSMA7O14818 248 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 EIF3JO75822 258 aaKnown RBP18.48■□□□□ 0.55
ZNF541-201ENST00000263351 CABP7Q86V35 215 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 DNAAF5Q86Y56 855 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 NOC4LQ9BVI4 516 aaKnown RBP18.48■□□□□ 0.55
ZNF541-201ENST00000263351 UBA5Q9GZZ9 404 aa18.48■□□□□ 0.55
ZNF541-201ENST00000263351 MAGEC2Q9UBF1 373 aaPredicted RBP18.48■□□□□ 0.55
ZNF541-201ENST00000263351 POTEB2H3BUK9 544 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 PRPF6O94906 941 aaKnown RBP18.47■□□□□ 0.55
ZNF541-201ENST00000263351 HIBADHP31937 336 aaKnown RBP18.47■□□□□ 0.55
ZNF541-201ENST00000263351 C2CD5Q86YS7 1000 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 LRRC1Q9BTT6 524 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 SELENOOQ9BVL4 669 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 TRIM9Q9C026 710 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 ARHGAP20Q9P2F6 1191 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 BIN2Q9UBW5 565 aaPredicted RBP18.47■□□□□ 0.55
ZNF541-201ENST00000263351 RHOBTB3O94955 611 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 TRAPPC10P48553 1259 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 CCDC96Q2M329 555 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 WDR93Q6P2C0 686 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 PLCD3Q8N3E9 789 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 NUDT12Q9BQG2 462 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 MMTAG2Q9BU76 263 aaKnown RBP18.47■□□□□ 0.55
ZNF541-201ENST00000263351 MKNK2Q9HBH9 465 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 PSD3Q9NYI0 1048 aa18.47■□□□□ 0.55
ZNF541-201ENST00000263351 TRIM14Q14142 442 aa18.46■□□□□ 0.55
ZNF541-201ENST00000263351 DDB1Q16531 1140 aa18.46■□□□□ 0.55
ZNF541-201ENST00000263351 PTPROQ16827 1216 aa18.46■□□□□ 0.55
ZNF541-201ENST00000263351 PAPD7Q5XG87 772 aaKnown RBP18.46■□□□□ 0.55
ZNF541-201ENST00000263351 ARL6IP4Q66PJ3 421 aaKnown RBP18.46■□□□□ 0.55
ZNF541-201ENST00000263351 DZIP1Q86YF9 867 aaKnown RBP18.46■□□□□ 0.55
ZNF541-201ENST00000263351 P2RX5Q93086 422 aa18.46■□□□□ 0.55
ZNF541-201ENST00000263351 DLEC1Q9Y238 1755 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms