RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 LMNB2Q03252 620 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 STAMBPL1Q96FJ0 436 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 HAUS7Q99871 368 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 ZMYND12Q9H0C1 365 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 FBLN1P23142 703 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 RSBN1LQ6PCB5 846 aaPredicted RBP7.8□□□□□ -1.16
HERC2-201ENST00000261609 TRIM42Q8IWZ5 723 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 PTPN22Q9Y2R2 807 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 EIF3BP55884 814 aaKnown RBP7.8□□□□□ -1.16
HERC2-201ENST00000261609 PTPN21Q16825 1174 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 TMEM87AQ8NBN3 555 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 ACRBPQ8NEB7 543 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.8□□□□□ -1.16
HERC2-201ENST00000261609 EPN3Q9H201 632 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 SMYD3Q9H7B4 428 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 DKC1O60832 514 aaKnown RBP eCLIP7.8□□□□□ -1.167e-8■■■□□ 16.4
HERC2-201ENST00000261609 PDE6CP51160 858 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 C1orf146Q5VVC0 180 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 STAMQ92783 540 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 PHACTR3Q96KR7 559 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.8□□□□□ -1.16
HERC2-201ENST00000261609 BZW2Q9Y6E2 419 aaKnown RBP7.8□□□□□ -1.16
HERC2-201ENST00000261609 TMEM232C9JQI7 657 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 HEXIM1O94992 359 aaKnown RBP7.8□□□□□ -1.16
HERC2-201ENST00000261609 MT-ND3P03897 115 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 MAGOHP61326 146 aaKnown RBP7.8□□□□□ -1.16
HERC2-201ENST00000261609 CUL1Q13616 776 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 ARHGEF18Q6ZSZ5 1173 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 TTC6Q86TZ1 520 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 APPBP2Q92624 585 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 CCT8L2Q96SF2 557 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 FGFR1OP2Q9NVK5 253 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 PPIP5K1Q6PFW1 1433 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 TTC4O95801 387 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 CCDC159P0C7I6 412 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 CTIFO43310 598 aaKnown RBP7.8□□□□□ -1.16
HERC2-201ENST00000261609 N4BP1O75113 896 aaKnown RBP7.8□□□□□ -1.16
HERC2-201ENST00000261609 HDLBPQ00341 1268 aaKnown RBP7.8□□□□□ -1.16
HERC2-201ENST00000261609 DPCR1Q3MIW9 517 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 MMEL1Q495T6 779 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 ARMCX6Q7L4S7 300 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 VSTM4Q8IW00 320 aa7.8□□□□□ -1.16
HERC2-201ENST00000261609 ARHGEF35A5YM69 484 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 IRS4O14654 1257 aaPredicted RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 GCNT3O95395 438 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 RPN1P04843 607 aaKnown RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 HARSP12081 509 aaKnown RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 LAMB3Q13751 1172 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 TMEM259Q4ZIN3 620 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 BEND6Q5SZJ8 279 aaPredicted RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 GFM2Q969S9 779 aaKnown RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 ZBTB10Q96DT7 871 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 PSD3Q9NYI0 1048 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 KCNJ14Q9UNX9 436 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 MRC2Q9UBG0 1479 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 KRT14P02533 472 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 CASP14P31944 242 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 MAGEF1Q9HAY2 307 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 FAM135BQ49AJ0 1406 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 CARD10Q9BWT7 1032 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 ABCA10Q8WWZ4 1543 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 CHMP2AO43633 222 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 ESRRAP11474 423 aaPredicted RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 SLC12A2P55011 1212 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 GTPBP6O43824 516 aaPredicted RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 KRT3P12035 628 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 GLE1Q53GS7 698 aaKnown RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 NAA35Q5VZE5 725 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 ANKRD2Q9GZV1 360 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 UTP6Q9NYH9 597 aaKnown RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 KDM3AQ9Y4C1 1321 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 PPP2R5DQ14738 602 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 JADE1Q6IE81 842 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 CAPN12Q6ZSI9 719 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 COL17A1Q9UMD9 1497 aaPredicted RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 MOCS3O95396 460 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 KBTBD3Q8NAB2 608 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 RAPGEF3O95398 923 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 GSPT1P15170 499 aaKnown RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 IDI1Q13907 227 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 CABP7Q86V35 215 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 ZNF513Q8N8E2 541 aaPredicted RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 ZNF274Q96GC6 653 aaPredicted RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 TRIM56Q9BRZ2 755 aaKnown RBP7.79□□□□□ -1.16
HERC2-201ENST00000261609 ZMYM6O95789 1325 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 DNAJC6O75061 913 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 SNX29Q8TEQ0 813 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 SDCCAG3Q96C92 435 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 NT5C3AQ9H0P0 336 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 ANAPC5Q9UJX4 755 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 SUPT3HO75486 399 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 OTUD6AQ7L8S5 288 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 TEKT1Q969V4 418 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 ACEP12821 1306 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 CFLARO15519 480 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 TXKP42681 527 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 LRRC37BQ96QE4 947 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 CD248Q9HCU0 757 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 GOLGA8QA0A0J9YX86 632 aa7.79□□□□□ -1.16
HERC2-201ENST00000261609 GOLGA8OA6NCC3 632 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms