RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 DHX58Q96C10 678 aa25.4■■□□□ 1.66
SIX3-201ENST00000260653 FEZ1Q99689 392 aa25.4■■□□□ 1.66
SIX3-201ENST00000260653 USP17L15C9J2P7 530 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 USP17L13C9JLJ4 530 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 USP17L11C9JVI0 530 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 USP17L18D6R9N7 530 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 USP17L22D6RA61 530 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 USP17L17D6RBQ6 530 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 USP17L19D6RCP7 530 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 USP17L20D6RJB6 530 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 INPP5BP32019 993 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 USP17L24Q0WX57 530 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 USP17L6PQ6QN14 398 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 SMCHD1A6NHR9 2005 aa25.39■■□□□ 1.66
SIX3-201ENST00000260653 EDIL3O43854 480 aa25.39■■□□□ 1.65
SIX3-201ENST00000260653 NEMFO60524 1076 aa25.39■■□□□ 1.65
SIX3-201ENST00000260653 CTNND1O60716 968 aaKnown RBP25.39■■□□□ 1.65
SIX3-201ENST00000260653 MDM2Q00987 491 aaPredicted RBP25.39■■□□□ 1.65
SIX3-201ENST00000260653 DPCR1Q3MIW9 517 aa25.39■■□□□ 1.65
SIX3-201ENST00000260653 TUBE1Q9UJT0 475 aa25.39■■□□□ 1.65
SIX3-201ENST00000260653 LAD1O00515 517 aa25.38■■□□□ 1.65
SIX3-201ENST00000260653 CAVIN2O95810 425 aa25.38■■□□□ 1.65
SIX3-201ENST00000260653 LONP1P36776 959 aaKnown RBP25.38■■□□□ 1.65
SIX3-201ENST00000260653 ZRSR1Q15695 479 aaKnown RBP25.38■■□□□ 1.65
SIX3-201ENST00000260653 DTHD1Q6ZMT9 781 aa25.38■■□□□ 1.65
SIX3-201ENST00000260653 GRAMD1CQ8IYS0 662 aa25.38■■□□□ 1.65
SIX3-201ENST00000260653 FZD1Q9UP38 647 aa25.38■■□□□ 1.65
SIX3-201ENST00000260653 CDC25AP30304 524 aa25.38■■□□□ 1.65
SIX3-201ENST00000260653 MYH7BA7E2Y1 1941 aa25.38■■□□□ 1.65
SIX3-201ENST00000260653 ELOA2Q8IYF1 753 aaPredicted RBP25.37■■□□□ 1.65
SIX3-201ENST00000260653 POLR2AP24928 1970 aaKnown RBP25.37■■□□□ 1.65
SIX3-201ENST00000260653 OR52Z1P0C646 297 aa25.37■■□□□ 1.65
SIX3-201ENST00000260653 PRR29P0C7W0 189 aa25.37■■□□□ 1.65
SIX3-201ENST00000260653 POSTNQ15063 836 aa25.37■■□□□ 1.65
SIX3-201ENST00000260653 DCAF15Q66K64 600 aa25.37■■□□□ 1.65
SIX3-201ENST00000260653 ISM2Q6H9L7 571 aa25.37■■□□□ 1.65
SIX3-201ENST00000260653 POTEDQ86YR6 584 aa25.37■■□□□ 1.65
SIX3-201ENST00000260653 KIFC2Q96AC6 838 aa25.37■■□□□ 1.65
SIX3-201ENST00000260653 TDP2O95551 362 aa25.36■■□□□ 1.65
SIX3-201ENST00000260653 PRPHP41219 470 aa25.36■■□□□ 1.65
SIX3-201ENST00000260653 CEP57L1Q8IYX8 460 aa25.36■■□□□ 1.65
SIX3-201ENST00000260653 FBXO28Q9NVF7 368 aa25.36■■□□□ 1.65
SIX3-201ENST00000260653 PCDHA5Q9Y5H7 936 aa25.36■■□□□ 1.65
SIX3-201ENST00000260653 AP5Z1O43299 807 aa25.36■■□□□ 1.65
SIX3-201ENST00000260653 PLCB2Q00722 1185 aa25.36■■□□□ 1.65
SIX3-201ENST00000260653 IQCB1Q15051 598 aa25.36■■□□□ 1.65
SIX3-201ENST00000260653 GLT8D2Q9H1C3 349 aa25.36■■□□□ 1.65
SIX3-201ENST00000260653 MEIS2O14770 477 aa25.35■■□□□ 1.65
SIX3-201ENST00000260653 SAMD1Q6SPF0 538 aaPredicted RBP25.35■■□□□ 1.65
SIX3-201ENST00000260653 CHURC1Q8WUH1 139 aa25.35■■□□□ 1.65
SIX3-201ENST00000260653 HOOK1Q9UJC3 728 aaKnown RBP25.35■■□□□ 1.65
SIX3-201ENST00000260653 DOCK1Q14185 1865 aa25.35■■□□□ 1.65
SIX3-201ENST00000260653 PP2D1A8MPX8 630 aa25.35■■□□□ 1.65
SIX3-201ENST00000260653 SLC37A4O43826 429 aa25.35■■□□□ 1.65
SIX3-201ENST00000260653 NLRP12P59046 1061 aa25.35■■□□□ 1.65
SIX3-201ENST00000260653 DGKZQ13574 1117 aa25.35■■□□□ 1.65
SIX3-201ENST00000260653 SLFN14P0C7P3 912 aa25.34■■□□□ 1.65
SIX3-201ENST00000260653 ORC2Q13416 577 aaPredicted RBP25.34■■□□□ 1.65
SIX3-201ENST00000260653 C9orf131Q5VYM1 1079 aa25.34■■□□□ 1.65
SIX3-201ENST00000260653 WRNIP1Q96S55 665 aa25.34■■□□□ 1.65
SIX3-201ENST00000260653 GINM1Q9NU53 330 aa25.34■■□□□ 1.65
SIX3-201ENST00000260653 OPLAHO14841 1288 aa25.34■■□□□ 1.65
SIX3-201ENST00000260653 E2F4Q16254 413 aa25.34■■□□□ 1.65
SIX3-201ENST00000260653 KANK3Q6NY19 840 aa25.34■■□□□ 1.65
SIX3-201ENST00000260653 ZKSCAN4Q969J2 545 aaPredicted RBP25.34■■□□□ 1.65
SIX3-201ENST00000260653 CCDC174Q6PII3 467 aa25.33■■□□□ 1.65
SIX3-201ENST00000260653 ILDR2Q71H61 639 aa25.33■■□□□ 1.65
SIX3-201ENST00000260653 P2RX7Q99572 595 aaKnown RBP25.33■■□□□ 1.65
SIX3-201ENST00000260653 A0A0U1RQG5 324 aaPredicted RBP25.33■■□□□ 1.65
SIX3-201ENST00000260653 ADCY5O95622 1261 aa25.33■■□□□ 1.65
SIX3-201ENST00000260653 FAM160B2Q86V87 743 aa25.33■■□□□ 1.65
SIX3-201ENST00000260653 ZMYND15Q9H091 742 aa25.33■■□□□ 1.65
SIX3-201ENST00000260653 KIAA1683Q9H0B3 1180 aa25.33■■□□□ 1.65
SIX3-201ENST00000260653 RANBP17Q9H2T7 1088 aaKnown RBP25.33■■□□□ 1.65
SIX3-201ENST00000260653 ZNF112Q9UJU3 913 aa25.33■■□□□ 1.65
SIX3-201ENST00000260653 FEM1BQ9UK73 627 aa25.33■■□□□ 1.65
SIX3-201ENST00000260653 SSC5DA1L4H1 1573 aa25.33■■□□□ 1.65
SIX3-201ENST00000260653 PLA2G6O60733 806 aa25.32■■□□□ 1.64
SIX3-201ENST00000260653 LMOD1P29536 600 aaPredicted RBP25.32■■□□□ 1.64
SIX3-201ENST00000260653 HOOK2Q96ED9 719 aa25.32■■□□□ 1.64
SIX3-201ENST00000260653 AFMP43652 599 aa25.32■■□□□ 1.64
SIX3-201ENST00000260653 KARSQ15046 597 aaKnown RBP25.32■■□□□ 1.64
SIX3-201ENST00000260653 DHX40Q8IX18 779 aaKnown RBP25.32■■□□□ 1.64
SIX3-201ENST00000260653 SCYL3Q8IZE3 742 aa25.32■■□□□ 1.64
SIX3-201ENST00000260653 ANO3Q9BYT9 981 aa25.32■■□□□ 1.64
SIX3-201ENST00000260653 TXLNAP40222 546 aa25.31■■□□□ 1.64
SIX3-201ENST00000260653 MTMR2Q13614 643 aa25.31■■□□□ 1.64
SIX3-201ENST00000260653 PAGE5Q96GU1 130 aa25.31■■□□□ 1.64
SIX3-201ENST00000260653 MTMR9Q96QG7 549 aa25.31■■□□□ 1.64
SIX3-201ENST00000260653 NAT10Q9H0A0 1025 aaKnown RBP25.31■■□□□ 1.64
SIX3-201ENST00000260653 ADARB2Q9NS39 739 aaKnown RBP25.31■■□□□ 1.64
SIX3-201ENST00000260653 CALCRLQ16602 461 aa25.31■■□□□ 1.64
SIX3-201ENST00000260653 SH3RF1Q7Z6J0 888 aa25.31■■□□□ 1.64
SIX3-201ENST00000260653 AOPEPQ8N6M6 819 aa25.31■■□□□ 1.64
SIX3-201ENST00000260653 IQUBQ8NA54 791 aa25.31■■□□□ 1.64
SIX3-201ENST00000260653 PPP2R3BQ9Y5P8 575 aa25.31■■□□□ 1.64
SIX3-201ENST00000260653 PPP4R3AQ6IN85 833 aa25.3■■□□□ 1.64
SIX3-201ENST00000260653 LPAR1Q92633 364 aa25.3■■□□□ 1.64
SIX3-201ENST00000260653 TRIM44Q96DX7 344 aaPredicted RBP25.3■■□□□ 1.64
SIX3-201ENST00000260653 CASP1P29466 404 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms