RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 CACNB1Q02641 598 aaPredicted RBP14.78□□□□□ -0.04
PGBD1-201ENST00000259883 SF3A3Q12874 501 aaKnown RBP eCLIP14.78□□□□□ -0.04
PGBD1-201ENST00000259883 CCDC181Q5TID7 509 aa14.78□□□□□ -0.04
PGBD1-201ENST00000259883 USP17L2Q6R6M4 530 aa14.78□□□□□ -0.04
PGBD1-201ENST00000259883 MS4A14Q96JA4 679 aa14.78□□□□□ -0.04
PGBD1-201ENST00000259883 SELENOOQ9BVL4 669 aa14.78□□□□□ -0.04
PGBD1-201ENST00000259883 DMGDHQ9UI17 866 aaKnown RBP14.78□□□□□ -0.04
PGBD1-201ENST00000259883 LOC102724428A0A0B4J2F2 783 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 SIK1P57059 783 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 TNS2Q63HR2 1409 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 RRAGAQ7L523 313 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 TRAPPC11Q7Z392 1133 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 CABP7Q86V35 215 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 GLIS3Q8NEA6 775 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 IFT81Q8WYA0 676 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 LRRC1Q9BTT6 524 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 ACBD3Q9H3P7 528 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 TMEM260Q9NX78 707 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 PACSIN2Q9UNF0 486 aaPredicted RBP14.77□□□□□ -0.04
PGBD1-201ENST00000259883 MYH10P35580 1976 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 TAF1P21675 1872 aa14.77□□□□□ -0.04
PGBD1-201ENST00000259883 CAMTA2O94983 1202 aa14.77□□□□□ -0.05
PGBD1-201ENST00000259883 NTSR2O95665 410 aa14.77□□□□□ -0.05
PGBD1-201ENST00000259883 CYLC1P35663 651 aaPredicted RBP14.77□□□□□ -0.05
PGBD1-201ENST00000259883 CCT5P48643 541 aa14.77□□□□□ -0.05
PGBD1-201ENST00000259883 FAM182BQ5T319 152 aa14.77□□□□□ -0.05
PGBD1-201ENST00000259883 CLEC10AQ8IUN9 316 aa14.77□□□□□ -0.05
PGBD1-201ENST00000259883 DHX37Q8IY37 1157 aaKnown RBP14.77□□□□□ -0.05
PGBD1-201ENST00000259883 NSUN4Q96CB9 384 aaKnown RBP14.77□□□□□ -0.05
PGBD1-201ENST00000259883 HAUS4Q9H6D7 363 aa14.77□□□□□ -0.05
PGBD1-201ENST00000259883 CALM1P0DP23 149 aa14.77□□□□□ -0.05
PGBD1-201ENST00000259883 CALM2P0DP24 149 aa14.77□□□□□ -0.05
PGBD1-201ENST00000259883 CALM3P0DP25 149 aa14.77□□□□□ -0.05
PGBD1-201ENST00000259883 ELOA2Q8IYF1 753 aaPredicted RBP14.77□□□□□ -0.05
PGBD1-201ENST00000259883 FAM71BQ8TC56 605 aa14.77□□□□□ -0.05
PGBD1-201ENST00000259883 SRP68Q9UHB9 627 aaKnown RBP14.77□□□□□ -0.05
PGBD1-201ENST00000259883 ZSCAN5CA6NGD5 496 aaPredicted RBP14.76□□□□□ -0.05
PGBD1-201ENST00000259883 ERVV-1B6SEH8 477 aa14.76□□□□□ -0.05
PGBD1-201ENST00000259883 ZEB2O60315 1214 aa14.76□□□□□ -0.05
PGBD1-201ENST00000259883 SYF2O95926 243 aaKnown RBP14.76□□□□□ -0.05
PGBD1-201ENST00000259883 GRIK5Q16478 980 aa14.76□□□□□ -0.05
PGBD1-201ENST00000259883 SH2D3CQ8N5H7 860 aa14.76□□□□□ -0.05
PGBD1-201ENST00000259883 SECISBP2LQ93073 1101 aaKnown RBP14.76□□□□□ -0.05
PGBD1-201ENST00000259883 IFIH1Q9BYX4 1025 aaKnown RBP14.76□□□□□ -0.05
PGBD1-201ENST00000259883 TCP11L1Q9NUJ3 509 aa14.76□□□□□ -0.05
PGBD1-201ENST00000259883 HPCAL4Q9UM19 191 aa14.76□□□□□ -0.05
PGBD1-201ENST00000259883 COL1A1P02452 1464 aaPredicted RBP14.76□□□□□ -0.05
PGBD1-201ENST00000259883 FRMPD2Q68DX3 1309 aaPredicted RBP14.76□□□□□ -0.05
PGBD1-201ENST00000259883 EIF3CLB5ME19 914 aaKnown RBP14.76□□□□□ -0.05
PGBD1-201ENST00000259883 KIF5BP33176 963 aa14.76□□□□□ -0.05
PGBD1-201ENST00000259883 MUM1L1Q5H9M0 696 aa14.76□□□□□ -0.05
PGBD1-201ENST00000259883 RCSD1Q6JBY9 416 aa14.76□□□□□ -0.05
PGBD1-201ENST00000259883 HNRNPLLQ8WVV9 542 aaKnown RBP14.76□□□□□ -0.05
PGBD1-201ENST00000259883 EIF3CQ99613 913 aaKnown RBP14.76□□□□□ -0.05
PGBD1-201ENST00000259883 IL17RBQ9NRM6 502 aa14.76□□□□□ -0.05
PGBD1-201ENST00000259883 ITIH6Q6UXX5 1313 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 GOLGA6BA6NDN3 693 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 ZNF263O14978 683 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 CYTH3O43739 400 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 MARCH6O60337 910 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 LIG3P49916 1009 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 GUCY2FP51841 1108 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 RASSF7Q02833 373 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 MICALL1Q8N3F8 863 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 SH3RF3Q8TEJ3 882 aaPredicted RBP14.75□□□□□ -0.05
PGBD1-201ENST00000259883 DUSP9Q99956 384 aaKnown RBP14.75□□□□□ -0.05
PGBD1-201ENST00000259883 ANKIB1Q9P2G1 1089 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 PCDHA6Q9UN73 950 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 PCDHA4Q9UN74 947 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 PCDHA8Q9Y5H6 950 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 GOLGA6CA6NDK9 693 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 SEMA3EO15041 775 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 DDAH1O94760 285 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 GOLGA6DP0CG33 693 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 HIBADHP31937 336 aaKnown RBP14.75□□□□□ -0.05
PGBD1-201ENST00000259883 EIF4A3P38919 411 aaKnown RBP14.75□□□□□ -0.05
PGBD1-201ENST00000259883 KRT83P78385 493 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 SLC35G1Q2M3R5 365 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 ZNF444Q8N0Y2 327 aaPredicted RBP14.75□□□□□ -0.05
PGBD1-201ENST00000259883 GOLGA6AQ9NYA3 693 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 MYH13Q9UKX3 1938 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 POTEMA6NI47 508 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 GFPT1Q06210 699 aaPredicted RBP14.75□□□□□ -0.05
PGBD1-201ENST00000259883 CACNA2D4Q7Z3S7 1137 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 NELFCDQ8IXH7 590 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 CDK5RAP3Q96JB5 506 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.75□□□□□ -0.05
PGBD1-201ENST00000259883 GOLPH3Q9H4A6 298 aa14.75□□□□□ -0.05
PGBD1-201ENST00000259883 LONP1P36776 959 aaKnown RBP14.74□□□□□ -0.05
PGBD1-201ENST00000259883 TTI2Q6NXR4 508 aa14.74□□□□□ -0.05
PGBD1-201ENST00000259883 P2RX5Q93086 422 aa14.74□□□□□ -0.05
PGBD1-201ENST00000259883 CAPN11Q9UMQ6 739 aa14.74□□□□□ -0.05
PGBD1-201ENST00000259883 CHD4Q14839 1912 aa14.74□□□□□ -0.05
PGBD1-201ENST00000259883 LRRC10BA6NIK2 292 aa14.74□□□□□ -0.05
PGBD1-201ENST00000259883 RASSF10A6NK89 507 aa14.74□□□□□ -0.05
PGBD1-201ENST00000259883 KLRC4O43908 158 aa14.74□□□□□ -0.05
PGBD1-201ENST00000259883 CALML3P27482 149 aa14.74□□□□□ -0.05
PGBD1-201ENST00000259883 DNM2P50570 870 aa14.74□□□□□ -0.05
PGBD1-201ENST00000259883 TRIM14Q14142 442 aa14.74□□□□□ -0.05
PGBD1-201ENST00000259883 POTEDQ86YR6 584 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms