RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SHHQ15465 462 aa22.39■■□□□ 1.17
TM6SF1-201ENST00000258909 C9orf50Q5SZB4 431 aa22.39■■□□□ 1.17
TM6SF1-201ENST00000258909 GPR153Q6NV75 609 aa22.39■■□□□ 1.17
TM6SF1-201ENST00000258909 CYP39A1Q9NYL5 469 aa22.39■■□□□ 1.17
TM6SF1-201ENST00000258909 LCTP09848 1927 aa22.38■■□□□ 1.17
TM6SF1-201ENST00000258909 ZNF213O14771 459 aa22.38■■□□□ 1.17
TM6SF1-201ENST00000258909 PDHBP11177 359 aa22.38■■□□□ 1.17
TM6SF1-201ENST00000258909 PTGS1P23219 599 aa22.38■■□□□ 1.17
TM6SF1-201ENST00000258909 BTNL9Q6UXG8 535 aa22.38■■□□□ 1.17
TM6SF1-201ENST00000258909 NUP133Q8WUM0 1156 aa22.38■■□□□ 1.17
TM6SF1-201ENST00000258909 MOXD2PA6NHM9 499 aa22.37■■□□□ 1.17
TM6SF1-201ENST00000258909 ASGR1P07306 291 aa22.37■■□□□ 1.17
TM6SF1-201ENST00000258909 GJA9P57773 515 aa22.37■■□□□ 1.17
TM6SF1-201ENST00000258909 GNASQ5JWF2 1037 aa22.37■■□□□ 1.17
TM6SF1-201ENST00000258909 NOL8Q76FK4 1167 aaKnown RBP22.37■■□□□ 1.17
TM6SF1-201ENST00000258909 EEPD1Q7L9B9 569 aa22.37■■□□□ 1.17
TM6SF1-201ENST00000258909 RNF41Q9H4P4 317 aaPredicted RBP22.37■■□□□ 1.17
TM6SF1-201ENST00000258909 SPC25Q9HBM1 224 aa22.37■■□□□ 1.17
TM6SF1-201ENST00000258909 LAMA4Q16363 1823 aa22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 ASB14A6NK59 587 aa22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 PCP11498 1178 aaKnown RBP22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 IRX6P78412 446 aaPredicted RBP22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 BEX3Q00994 111 aa22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 TNFAIP2Q03169 654 aa22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 ESR2Q92731 530 aa22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 VTI1AQ96AJ9 217 aa22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 TTC14Q96N46 770 aa22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 UPF3AQ9H1J1 476 aaKnown RBP22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 PDGFCQ9NRA1 345 aa22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 TMEM39AQ9NV64 488 aa22.36■■□□□ 1.17
TM6SF1-201ENST00000258909 NFIBO00712 420 aa22.35■■□□□ 1.17
TM6SF1-201ENST00000258909 CTAGE5O15320 804 aa22.35■■□□□ 1.17
TM6SF1-201ENST00000258909 CST5P28325 142 aaPredicted RBP22.35■■□□□ 1.17
TM6SF1-201ENST00000258909 ZNF543Q08ER8 600 aa22.35■■□□□ 1.17
TM6SF1-201ENST00000258909 FAAP100Q0VG06 881 aa22.35■■□□□ 1.17
TM6SF1-201ENST00000258909 BAATQ14032 418 aaPredicted RBP22.35■■□□□ 1.17
TM6SF1-201ENST00000258909 PCSK9Q8NBP7 692 aaKnown RBP22.35■■□□□ 1.17
TM6SF1-201ENST00000258909 GLT1D1Q96MS3 346 aa22.35■■□□□ 1.17
TM6SF1-201ENST00000258909 LRRC37A2A6NM11 1700 aa22.35■■□□□ 1.17
TM6SF1-201ENST00000258909 KDM4AO75164 1064 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 GOLGA8HP0CJ92 632 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 RAG1P15918 1043 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 PDE4AP27815 886 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 TMEM63BQ5T3F8 832 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 FBXO16Q8IX29 292 aaPredicted RBP22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 CPVLQ9H3G5 476 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 DCDC2CA8MYV0 355 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 B4E1Z4 1266 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 HIP1O00291 1037 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 KIAA0355O15063 1070 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 ANKRD33Q7Z3H0 272 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 IL25Q9H293 177 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 MTMR10Q9NXD2 777 aa22.34■■□□□ 1.17
TM6SF1-201ENST00000258909 PTPDC1A2A3K4 754 aa22.33■■□□□ 1.16
TM6SF1-201ENST00000258909 SNHG28P0DPA3 235 aa22.33■■□□□ 1.16
TM6SF1-201ENST00000258909 SMPD1P17405 629 aa22.33■■□□□ 1.16
TM6SF1-201ENST00000258909 EPHB4P54760 987 aa22.33■■□□□ 1.16
TM6SF1-201ENST00000258909 TAPT1Q6NXT6 567 aa22.33■■□□□ 1.16
TM6SF1-201ENST00000258909 FAM161BQ96MY7 647 aa22.33■■□□□ 1.16
TM6SF1-201ENST00000258909 TOX2Q96NM4 488 aa22.33■■□□□ 1.16
TM6SF1-201ENST00000258909 ELP1O95163 1332 aa22.33■■□□□ 1.16
TM6SF1-201ENST00000258909 SLC30A10Q6XR72 485 aa22.32■■□□□ 1.16
TM6SF1-201ENST00000258909 TLK2Q86UE8 772 aa22.32■■□□□ 1.16
TM6SF1-201ENST00000258909 CLEC4DQ8WXI8 215 aa22.32■■□□□ 1.16
TM6SF1-201ENST00000258909 UBA5Q9GZZ9 404 aa22.32■■□□□ 1.16
TM6SF1-201ENST00000258909 GNEQ9Y223 722 aaKnown RBP22.32■■□□□ 1.16
TM6SF1-201ENST00000258909 DYNC1LI2O43237 492 aaPredicted RBP22.31■■□□□ 1.16
TM6SF1-201ENST00000258909 CALML3P27482 149 aa22.31■■□□□ 1.16
TM6SF1-201ENST00000258909 CDK7P50613 346 aa22.31■■□□□ 1.16
TM6SF1-201ENST00000258909 CXCL17Q6UXB2 119 aa22.31■■□□□ 1.16
TM6SF1-201ENST00000258909 DGKHQ86XP1 1220 aa22.31■■□□□ 1.16
TM6SF1-201ENST00000258909 DSCC1Q9BVC3 393 aa22.31■■□□□ 1.16
TM6SF1-201ENST00000258909 A0A0C4DFX4 3053 aa22.3■■□□□ 1.16
TM6SF1-201ENST00000258909 GSPT1P15170 499 aaKnown RBP22.3■■□□□ 1.16
TM6SF1-201ENST00000258909 ALDH5A1P51649 535 aaPredicted RBP22.3■■□□□ 1.16
TM6SF1-201ENST00000258909 IMMTQ16891 758 aaKnown RBP22.3■■□□□ 1.16
TM6SF1-201ENST00000258909 KIAA1211Q6ZU35 1233 aa22.3■■□□□ 1.16
TM6SF1-201ENST00000258909 IQCA1Q86XH1 822 aa22.3■■□□□ 1.16
TM6SF1-201ENST00000258909 PNMA1Q8ND90 353 aa22.3■■□□□ 1.16
TM6SF1-201ENST00000258909 AP5M1Q9H0R1 490 aa22.3■■□□□ 1.16
TM6SF1-201ENST00000258909 ZSWIM5Q9P217 1185 aa22.3■■□□□ 1.16
TM6SF1-201ENST00000258909 A0A0U1RQG5 324 aaPredicted RBP22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 ARVCFO00192 962 aa22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 FPGSQ05932 587 aa22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 FSCN1Q16658 493 aaKnown RBP22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 USH1GQ495M9 461 aa22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 TTC22Q5TAA0 569 aa22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 IQSEC1Q6DN90 963 aa22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 RNF207Q6ZRF8 634 aa22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 ZSCAN10Q96SZ4 725 aaPredicted RBP22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 KAT14Q9H8E8 782 aa22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 ADD3Q9UEY8 706 aaKnown RBP22.29■■□□□ 1.16
TM6SF1-201ENST00000258909 NKX3-2P78367 333 aa22.28■■□□□ 1.16
TM6SF1-201ENST00000258909 ENAHQ8N8S7 591 aaPredicted RBP22.28■■□□□ 1.16
TM6SF1-201ENST00000258909 SLC17A8Q8NDX2 589 aa22.28■■□□□ 1.16
TM6SF1-201ENST00000258909 MORC4Q8TE76 937 aa22.28■■□□□ 1.16
TM6SF1-201ENST00000258909 VTA1Q9NP79 307 aa22.28■■□□□ 1.16
TM6SF1-201ENST00000258909 CTNNA3Q9UI47 895 aa22.28■■□□□ 1.16
TM6SF1-201ENST00000258909 TBX21Q9UL17 535 aa22.28■■□□□ 1.16
TM6SF1-201ENST00000258909 RPS6P62753 249 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms