RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 CCDC50Q8IVM0 306 aa12.8□□□□□ -0.36
TROAP-201ENST00000257909 MREGQ8N565 214 aa12.8□□□□□ -0.36
TROAP-201ENST00000257909 SH2D3CQ8N5H7 860 aa12.8□□□□□ -0.36
TROAP-201ENST00000257909 SHISA4Q96DD7 197 aa12.8□□□□□ -0.36
TROAP-201ENST00000257909 TUBGCP2Q9BSJ2 902 aa12.8□□□□□ -0.36
TROAP-201ENST00000257909 ACTR5Q9H9F9 607 aaPredicted RBP12.8□□□□□ -0.36
TROAP-201ENST00000257909 CD248Q9HCU0 757 aa12.8□□□□□ -0.36
TROAP-201ENST00000257909 RNF14Q9UBS8 474 aa12.8□□□□□ -0.36
TROAP-201ENST00000257909 GOLGA6L7A0A1B0GV03 622 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 HMGB1P1B2RPK0 211 aaPredicted RBP12.79□□□□□ -0.36
TROAP-201ENST00000257909 B4DLN1 442 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 MBD4O95243 580 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 MDH1P40925 334 aaKnown RBP12.79□□□□□ -0.36
TROAP-201ENST00000257909 MATR3P43243 847 aaKnown RBP eCLIP12.79□□□□□ -0.36
TROAP-201ENST00000257909 TBC1D8BQ0IIM8 1120 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 PAK2Q13177 524 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 TCIRG1Q13488 830 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 HOMEZQ8IX15 550 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 CCDC13Q8IYE1 715 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 C3orf20Q8ND61 904 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 MYCBPAPQ8TBZ2 947 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 TNFRSF25Q93038 417 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 CCT8L2Q96SF2 557 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 IFIH1Q9BYX4 1025 aaKnown RBP12.79□□□□□ -0.36
TROAP-201ENST00000257909 CAPN6Q9Y6Q1 641 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 GSG1L2A8MUP6 293 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 WNT7AO00755 349 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 MYL1P05976 194 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 TDO2P48775 406 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 GUCY1A3Q02108 690 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 CEP85LQ5SZL2 805 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 LDHAL6AQ6ZMR3 332 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 FAM114A1Q8IWE2 563 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 CCDC43Q96MW1 224 aaKnown RBP12.79□□□□□ -0.36
TROAP-201ENST00000257909 GDF3Q9NR23 364 aa12.79□□□□□ -0.36
TROAP-201ENST00000257909 MYH10P35580 1976 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 ZNF233A6NK53 670 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 PCCAP05165 728 aaPredicted RBP12.78□□□□□ -0.36
TROAP-201ENST00000257909 LONP1P36776 959 aaKnown RBP12.78□□□□□ -0.36
TROAP-201ENST00000257909 STAT6P42226 847 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 MAP3K12Q12852 859 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 ARL6IP4Q66PJ3 421 aaKnown RBP12.78□□□□□ -0.36
TROAP-201ENST00000257909 PPP4R3AQ6IN85 833 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 ARFGAP2Q8N6H7 521 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 ATP6V1G3Q96LB4 118 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 VEZTQ9HBM0 779 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 TSKSQ9UJT2 592 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 PCDHA13Q9Y5I0 950 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 PAPPAQ13219 1627 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 RASSF10A6NK89 507 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 ZNF263O14978 683 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 LCA5LO95447 670 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 ADRA2BP18089 450 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 HNRNPH3P31942 346 aaKnown RBP12.78□□□□□ -0.36
TROAP-201ENST00000257909 PMS1P54277 932 aaKnown RBP12.78□□□□□ -0.36
TROAP-201ENST00000257909 TRIM28Q13263 835 aaKnown RBP12.78□□□□□ -0.36
TROAP-201ENST00000257909 NFRKBQ6P4R8 1299 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 C6orf89Q6UWU4 347 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 PCMTD1Q96MG8 357 aaPredicted RBP12.78□□□□□ -0.36
TROAP-201ENST00000257909 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
TROAP-201ENST00000257909 RBM28Q9NW13 759 aaKnown RBP12.78□□□□□ -0.36
TROAP-201ENST00000257909 ODF2LQ9ULJ1 636 aa12.78□□□□□ -0.36
TROAP-201ENST00000257909 MOCS3O95396 460 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 A1BGP04217 495 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 IFT88Q13099 833 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 CFAP221Q4G0U5 840 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 TTI2Q6NXR4 508 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 CCDC121Q6ZUS5 278 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 MAGEB6Q8N7X4 407 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 TTLL11Q8NHH1 800 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 MAGEC3Q8TD91 643 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 SMCR8Q8TEV9 937 aaPredicted RBP12.77□□□□□ -0.37
TROAP-201ENST00000257909 WHAMMQ8TF30 809 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 DDX17Q92841 729 aaKnown RBP12.77□□□□□ -0.37
TROAP-201ENST00000257909 DHTKD1Q96HY7 919 aaPredicted RBP12.77□□□□□ -0.37
TROAP-201ENST00000257909 ERGIC2Q96RQ1 377 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 ARMT1Q9H993 441 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 SLC40A1Q9NP59 571 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 PLAGL2Q9UPG8 496 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 PRDM1O75626 825 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 HDLBPQ00341 1268 aaKnown RBP12.77□□□□□ -0.37
TROAP-201ENST00000257909 FUT2Q10981 343 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 SEC23AQ15436 765 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 SNCBQ16143 134 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 IQCA1Q86XH1 822 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 CSGALNACT2Q8N6G5 542 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 MIEF2Q96C03 454 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 CNNM1Q9NRU3 951 aa12.77□□□□□ -0.37
TROAP-201ENST00000257909 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.37
TROAP-201ENST00000257909 BICDL2A1A5D9 508 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 RHOBTB3O94955 611 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 PHKA1P46020 1223 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 MRPL12P52815 198 aaKnown RBP12.76□□□□□ -0.37
TROAP-201ENST00000257909 MRPS25P82663 173 aaKnown RBP12.76□□□□□ -0.37
TROAP-201ENST00000257909 ITGB3BPQ13352 177 aaPredicted RBP12.76□□□□□ -0.37
TROAP-201ENST00000257909 FKBP15Q5T1M5 1219 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 VGLL2Q8N8G2 317 aa12.76□□□□□ -0.37
TROAP-201ENST00000257909 ZBTB38Q8NAP3 1195 aaPredicted RBP12.76□□□□□ -0.37
TROAP-201ENST00000257909 GIMAP8Q8ND71 665 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms