RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 KIAA0753Q2KHM9 967 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 GKAP1Q5VSY0 366 aaPredicted RBP13.65□□□□□ -0.22
USP30-201ENST00000257548 NELFCDQ8IXH7 590 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 TSGA10Q9BZW7 698 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 PDE2AO00408 941 aaPredicted RBP13.65□□□□□ -0.22
USP30-201ENST00000257548 ELF1P32519 619 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 MAP3K14Q99558 947 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 LY9Q9HBG7 655 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 ACTN4O43707 911 aaKnown RBP13.65□□□□□ -0.22
USP30-201ENST00000257548 CDC25CP30307 473 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 INF2Q27J81 1249 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 CALML4Q96GE6 196 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 KCNK9Q9NPC2 374 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 PLAAQ9Y263 795 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 ADGRL3Q9HAR2 1447 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 GTPBP6O43824 516 aaPredicted RBP13.64□□□□□ -0.23
USP30-201ENST00000257548 TXKP42681 527 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 SLCO1A2P46721 670 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 LRRC41Q15345 812 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 DAAM2Q86T65 1068 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 NLRP14Q86W24 1093 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 SAMD15Q9P1V8 674 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 SALL1Q9NSC2 1324 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 CTNND1O60716 968 aaKnown RBP13.64□□□□□ -0.23
USP30-201ENST00000257548 RFX5P48382 616 aaPredicted RBP13.64□□□□□ -0.23
USP30-201ENST00000257548 KIF11P52732 1056 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 BIRC2Q13490 618 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 PRPF38AQ8NAV1 312 aaKnown RBP13.64□□□□□ -0.23
USP30-201ENST00000257548 OSBPL9Q96SU4 736 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 TSG101Q99816 390 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 GOLPH3Q9H4A6 298 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 GREM2Q9H772 168 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 IRS4O14654 1257 aaPredicted RBP13.64□□□□□ -0.23
USP30-201ENST00000257548 MYBL1P10243 752 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 PDHBP11177 359 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 GFPT1Q06210 699 aaPredicted RBP13.64□□□□□ -0.23
USP30-201ENST00000257548 TCIRG1Q13488 830 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 MARCH10Q8NA82 808 aaPredicted RBP13.64□□□□□ -0.23
USP30-201ENST00000257548 PPP1R12CQ9BZL4 782 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 TRIM6Q9C030 488 aaPredicted RBP13.64□□□□□ -0.23
USP30-201ENST00000257548 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 BMP2KQ9NSY1 1161 aaPredicted RBP13.64□□□□□ -0.23
USP30-201ENST00000257548 RBM12Q9NTZ6 932 aaKnown RBP13.64□□□□□ -0.23
USP30-201ENST00000257548 PCDHA13Q9Y5I0 950 aa13.64□□□□□ -0.23
USP30-201ENST00000257548 ENO4A6NNW6 628 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 TMEM110-MUSTN1A8MSY1 372 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 PPP1R37O75864 691 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 ADD2P35612 726 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 WDR93Q6P2C0 686 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 ZNF473Q8WTR7 871 aaKnown RBP13.63□□□□□ -0.23
USP30-201ENST00000257548 FAM167BQ9BTA0 163 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 VIPAS39Q9H9C1 493 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 RWDD2AQ9UIY3 292 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 CAPN6Q9Y6Q1 641 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 NEFHP12036 1026 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 DDX42Q86XP3 938 aaKnown RBP eCLIP13.63□□□□□ -0.23
USP30-201ENST00000257548 ATP8A1Q9Y2Q0 1164 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 PIK3C2AO00443 1686 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 A0A087X0B3 334 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 BICDL2A1A5D9 508 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 PAX7P23759 505 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 TRAPPC11Q7Z392 1133 aa13.63□□□□□ -0.23
USP30-201ENST00000257548 ATF3P18847 181 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 POLR2FP61218 127 aaKnown RBP13.62□□□□□ -0.23
USP30-201ENST00000257548 ZNF658Q5TYW1 1059 aaPredicted RBP13.62□□□□□ -0.23
USP30-201ENST00000257548 LBHD1Q9BQE6 289 aaPredicted RBP13.62□□□□□ -0.23
USP30-201ENST00000257548 ADAMTS1Q9UHI8 967 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 AKAP12Q02952 1782 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 PPP1R3GB7ZBB8 358 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 UQCRFS1P1P0C7P4 283 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 BCAMP50895 628 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 AMPD3Q01432 767 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 PDIA6Q15084 440 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 RPS6KA1Q15418 735 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 LCORLQ8N3X6 602 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 TSEN2Q8NCE0 465 aaKnown RBP13.62□□□□□ -0.23
USP30-201ENST00000257548 SPDL1Q96EA4 605 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 NUP58Q9BVL2 599 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 CCNT1O60563 726 aaKnown RBP13.62□□□□□ -0.23
USP30-201ENST00000257548 IGHMBP2P38935 993 aaKnown RBP13.62□□□□□ -0.23
USP30-201ENST00000257548 SOS2Q07890 1332 aaPredicted RBP13.62□□□□□ -0.23
USP30-201ENST00000257548 DPYDQ12882 1025 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 SLC9C1Q4G0N8 1177 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 EMBQ6PCB8 327 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 NRKQ7Z2Y5 1582 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 FMNL3Q8IVF7 1028 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 CCDC13Q8IYE1 715 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 CCDC63Q8NA47 563 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 SPATA5Q8NB90 893 aa13.62□□□□□ -0.23
USP30-201ENST00000257548 GSTTP1A0A1W2PQM5 241 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 TECP42680 631 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 ZBED6P86452 979 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 KLHL30Q0D2K2 578 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 ZKSCAN8Q15776 578 aaPredicted RBP13.61□□□□□ -0.23
USP30-201ENST00000257548 NAIF1Q69YI7 327 aaPredicted RBP13.61□□□□□ -0.23
USP30-201ENST00000257548 RUFY4Q6ZNE9 571 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 ANKRD42Q8N9B4 389 aa13.61□□□□□ -0.23
USP30-201ENST00000257548 AGXT2Q9BYV1 514 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms