RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 UBXN1Q04323 297 aa18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 SPAG1Q07617 926 aa18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 CNGA4Q8IV77 575 aa18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 REXO1Q8N1G1 1221 aaKnown RBP18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 NAA15Q9BXJ9 866 aaKnown RBP18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 ABHD10Q9NUJ1 306 aa18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 ANKRD31Q8N7Z5 1873 aa18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 RHOBTB3O94955 611 aa18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 GABPAQ06546 454 aa18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 KCNB1Q14721 858 aa18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 MMTAG2Q9BU76 263 aaKnown RBP18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 RIOX1Q9H6W3 641 aa18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 TTF2Q9UNY4 1162 aaKnown RBP18.6■□□□□ 0.57
UBQLN1-201ENST00000257468 KLRG2A4D1S0 409 aaPredicted RBP18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 PES1O00541 588 aaKnown RBP18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 MAP3K9P80192 1104 aa18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 SP8Q8IXZ3 490 aa18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 PROM2Q8N271 834 aa18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 GIMAP8Q8ND71 665 aaPredicted RBP18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 ANKRD20A12PQ8NF67 263 aa18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 UBXN4Q92575 508 aa18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 HPS3Q969F9 1004 aa18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 TRIM47Q96LD4 638 aa18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 SRRTQ9BXP5 876 aaKnown RBP18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 MRFAP1Q9Y605 127 aa18.59■□□□□ 0.57
UBQLN1-201ENST00000257468 H7C1D1 291 aa18.58■□□□□ 0.57
UBQLN1-201ENST00000257468 ZSCAN20P17040 1043 aaPredicted RBP18.58■□□□□ 0.57
UBQLN1-201ENST00000257468 TXKP42681 527 aa18.58■□□□□ 0.57
UBQLN1-201ENST00000257468 SLC27A3Q5K4L6 730 aa18.58■□□□□ 0.57
UBQLN1-201ENST00000257468 SLC37A4O43826 429 aa18.58■□□□□ 0.56
UBQLN1-201ENST00000257468 EDIL3O43854 480 aa18.58■□□□□ 0.56
UBQLN1-201ENST00000257468 TPM1P09493 284 aa18.58■□□□□ 0.56
UBQLN1-201ENST00000257468 FCER1AP12319 257 aa18.58■□□□□ 0.56
UBQLN1-201ENST00000257468 CLCN6P51797 869 aa18.58■□□□□ 0.56
UBQLN1-201ENST00000257468 TRIM9Q9C026 710 aa18.58■□□□□ 0.56
UBQLN1-201ENST00000257468 USP40Q9NVE5 1235 aa18.58■□□□□ 0.56
UBQLN1-201ENST00000257468 ATP6V0A2Q9Y487 856 aa18.58■□□□□ 0.56
UBQLN1-201ENST00000257468 PLIN4Q96Q06 1357 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 TDP2O95551 362 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 ASIC1P78348 528 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 STK4Q13043 487 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 TTBK2Q6IQ55 1244 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 TTI2Q6NXR4 508 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 AK8Q96MA6 479 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 COA1Q9GZY4 146 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 FECHP22830 423 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 KRT9P35527 623 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 PPP2R3AQ06190 1150 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 PDE4DQ08499 809 aa18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 DUSP9Q99956 384 aaKnown RBP18.57■□□□□ 0.56
UBQLN1-201ENST00000257468 IGKV6D-41A0A0C4DH26 115 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 PSMA7O14818 248 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 NKRFO15226 690 aaKnown RBP eCLIP18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 SMARCA1P28370 1054 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 ATP2B2Q01814 1243 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 UBE2SQ16763 222 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 CCDC51Q96ER9 411 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 ZC3H12CQ9C0D7 883 aaKnown RBP18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 EFCAB8A8MWE9 144 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 PPP1R11O60927 126 aaPredicted RBP18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 SLC16A2P36021 539 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 ADCY7P51828 1080 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 STIM1Q13586 685 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 MB21D1Q8N884 522 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 CHP1Q99653 195 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 KCNQ5Q9NR82 932 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 EXOC1Q9NV70 894 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 SERPINB13Q9UIV8 391 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 PCDHAC2Q9Y5I4 1007 aa18.56■□□□□ 0.56
UBQLN1-201ENST00000257468 TTC26A0AVF1 554 aa18.55■□□□□ 0.56
UBQLN1-201ENST00000257468 ESYT2A0FGR8 921 aa18.55■□□□□ 0.56
UBQLN1-201ENST00000257468 LGALS16A8MUM7 142 aa18.55■□□□□ 0.56
UBQLN1-201ENST00000257468 B4DLN1 442 aa18.55■□□□□ 0.56
UBQLN1-201ENST00000257468 MYL1P05976 194 aa18.55■□□□□ 0.56
UBQLN1-201ENST00000257468 SHMT1P34896 483 aa18.55■□□□□ 0.56
UBQLN1-201ENST00000257468 NFIAQ12857 509 aa18.55■□□□□ 0.56
UBQLN1-201ENST00000257468 SHROOM1Q2M3G4 852 aaPredicted RBP18.55■□□□□ 0.56
UBQLN1-201ENST00000257468 ASPRV1Q53RT3 343 aa18.55■□□□□ 0.56
UBQLN1-201ENST00000257468 JMJD4Q9H9V9 463 aa18.55■□□□□ 0.56
UBQLN1-201ENST00000257468 POTEMA6NI47 508 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 MPHOSPH10O00566 681 aaKnown RBP18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 SNHG28P0DPA3 235 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 SRGNP10124 158 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 CALCRLQ16602 461 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 ZNF569Q5MCW4 686 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 TEX35Q5T0J7 233 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 ANKRD40Q6AI12 368 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 CDC42EP5Q6NZY7 148 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 TMTC1Q8IUR5 882 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 ZFPM1Q8IX07 1006 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 ADGRF4Q8IZF3 695 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 CSGALNACT2Q8N6G5 542 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 GJA10Q969M2 543 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 MTMR9Q96QG7 549 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 SLF1Q9BQI6 1058 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 CUEDC2Q9H467 287 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 THAP9Q9H5L6 903 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 ZSWIM4Q9H7M6 989 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 FAM196BA6NMK8 535 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 TTLL1O95922 423 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms