RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PPM1FP49593 454 aaPredicted RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 ADARP55265 1226 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 SLC5A9Q2M3M2 681 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 ACMSDQ8TDX5 336 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 HVCN1Q96D96 273 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 C2CD2Q9Y426 696 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 KIF1BO60333 1816 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 SYNMO15061 1565 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 EDC4Q6P2E9 1401 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 F8VZ95 297 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 NDUFB5O43674 189 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 EIF2B2P49770 351 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 ITGA7Q13683 1181 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 NFRKBQ6P4R8 1299 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 HS2ST1Q7LGA3 356 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 CADPS2Q86UW7 1296 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 GALNT6Q8NCL4 622 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 IFT122Q9HBG6 1241 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 NOD2Q9HC29 1040 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 STRN4Q9NRL3 753 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 ANKIB1Q9P2G1 1089 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 CIDEBQ9UHD4 219 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 EIF4E1BA6NMX2 242 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 B4DLN1 442 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 ARHGAP6O43182 974 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 KRT6AP02538 564 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 KRT6BP04259 564 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 KIF6Q6ZMV9 814 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 NDUFAF2Q8N183 169 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 CCDC28BQ9BUN5 200 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 ZWILCHQ9H900 591 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 HAUS2Q9NVX0 235 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 TBKBP1A7MCY6 615 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 KRT8P05787 483 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 PSMA5P28066 241 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 SLC7A5Q01650 507 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 VTI1AQ96AJ9 217 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 RMND1Q9NWS8 449 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 A6NJR5 290 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 SPDYE16A6NNV3 312 aaPredicted RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 HIP1O00291 1037 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 EIF4BP23588 611 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 RARSP54136 660 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 NCCRP1Q6ZVX7 275 aaPredicted RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 GSDMAQ96QA5 445 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 ABCF3Q9NUQ8 709 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 HACD3Q9P035 362 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 KLHL14Q9P2G3 628 aa7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 DBNLQ9UJU6 430 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-201ENST00000257290 BIN1O00499 593 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 PER1O15534 1290 aaPredicted RBP7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 SEC24BO95487 1268 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 KCNA3P22001 575 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 IL4RP24394 825 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 GRIK3Q13003 919 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 PAK2Q13177 524 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 CDC37L1Q7L3B6 337 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 TRAPPC9Q96Q05 1148 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 DIABLOQ9NR28 239 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 SNX16P57768 344 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 SUZ12Q15022 739 aaKnown RBP7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 DAB2IPQ5VWQ8 1189 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 ANO5Q75V66 913 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 ST13P5Q8NFI4 369 aaPredicted RBP7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 LEO1Q8WVC0 666 aaPredicted RBP7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 ANGPTL2Q9UKU9 493 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 MAP3K5Q99683 1374 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 SFI1A8K8P3 1242 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 STX6O43752 255 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 CCNCP24863 283 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 OCA2Q04671 838 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 TJAP1Q5JTD0 557 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 EPAS1Q99814 870 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 SRCIN1Q9C0H9 1055 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 GPCPD1Q9NPB8 672 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 LZTFL1Q9NQ48 299 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 FHOD1Q9Y613 1164 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 CDC25BP30305 580 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 FAM192AQ9GZU8 254 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 SERPINA10Q9UK55 444 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 GTF3C4Q9UKN8 822 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 NLRP1Q9C000 1473 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 LMTK2Q8IWU2 1503 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 POTEB3A0JP26 581 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 SCRN3Q0VDG4 424 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 TAF12Q16514 161 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 POTEBQ6S5H4 581 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 SESTD1Q86VW0 696 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 IFT20Q8IY31 132 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 CCDC89Q8N998 374 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 FERMT1Q9BQL6 677 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 PLEKHG1Q9ULL1 1385 aa7.37□□□□□ -1.23
PDGFRA-201ENST00000257290 ANP32DO95626 131 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 ZSCAN22P10073 491 aaPredicted RBP7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 NFKBIAP25963 317 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 TMEM259Q4ZIN3 620 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 STK32CQ86UX6 486 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 LONP2Q86WA8 852 aa7.36□□□□□ -1.23
PDGFRA-201ENST00000257290 STKLD1Q8NE28 680 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms