RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 CTBSQ01459 385 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 PPP2R5EQ16537 467 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 MCM10Q7L590 875 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 VN1R5Q7Z5H4 357 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 FILIP1Q7Z7B0 1213 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 ZNF34Q8IZ26 560 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 TRPM4Q8TD43 1214 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 RPGRQ92834 1020 aaKnown RBP4.48□□□□□ -1.69
RBM39-201ENST00000253363 KCNB2Q92953 911 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 ZNF837Q96EG3 531 aaPredicted RBP4.48□□□□□ -1.69
RBM39-201ENST00000253363 UTP14AQ9BVJ6 771 aaKnown RBP4.48□□□□□ -1.69
RBM39-201ENST00000253363 ZC3H12CQ9C0D7 883 aaKnown RBP4.48□□□□□ -1.69
RBM39-201ENST00000253363 TAOK3Q9H2K8 898 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 CBX8Q9HC52 389 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 SIRPGQ9P1W8 387 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 STRIP2Q9ULQ0 834 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 R3HCC1Q9Y3T6 440 aaKnown RBP4.48□□□□□ -1.69
RBM39-201ENST00000253363 CACNA1FO60840 1977 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 NUP98P52948 1817 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 BBOX1O75936 387 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 TOMM70O94826 608 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 SRGNP10124 158 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 CPB1P15086 417 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 NRLP54845 237 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 CHMP4BP1P59074 171 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 C1QTNF8P60827 252 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 GPLD1P80108 840 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 TKFCQ3LXA3 575 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 LSRQ86X29 649 aaPredicted RBP4.48□□□□□ -1.69
RBM39-201ENST00000253363 SMC1BQ8NDV3 1235 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 STK31Q9BXU1 1019 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 CLEC4MQ9H2X3 399 aaPredicted RBP4.48□□□□□ -1.69
RBM39-201ENST00000253363 SRP68Q9UHB9 627 aaKnown RBP4.48□□□□□ -1.69
RBM39-201ENST00000253363 PFDN2Q9UHV9 154 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 TRIM33Q9UPN9 1127 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 NIP7Q9Y221 180 aaKnown RBP eCLIP4.48□□□□□ -1.69
RBM39-201ENST00000253363 LEMD3Q9Y2U8 911 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 MSRB2Q9Y3D2 182 aa4.48□□□□□ -1.69
RBM39-201ENST00000253363 THSD7BQ9C0I4 1608 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 SLC35F4A4IF30 521 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 ENPP3O14638 875 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 AXIN1O15169 862 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 MAP3K6O95382 1288 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 ECEL1O95672 775 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 KCNA3P22001 575 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 GIPRP48546 466 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 EIF6P56537 245 aaKnown RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 CWF19L2Q2TBE0 894 aaKnown RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 TBC1D9BQ66K14 1250 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 SPATC1Q76KD6 591 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 C11orf96Q7Z7L8 435 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 CCDC155Q8N6L0 562 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 DNAJB12Q9NXW2 375 aaKnown RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 G3BP2Q9UN86 482 aaKnown RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 SH3TC1Q8TE82 1336 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 SNED1Q8TER0 1413 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 COL1A1P02452 1464 aaPredicted RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 FAM86C2PA6NEL3 165 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 HMGB1P1B2RPK0 211 aaPredicted RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 CILPO75339 1184 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 NTSR2O95665 410 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 SELPP16109 830 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 NEXNQ0ZGT2 675 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 DDX10Q13206 875 aaKnown RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 TCIRG1Q13488 830 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 SQSTM1Q13501 440 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 COL9A2Q14055 689 aaPredicted RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 MAP1SQ66K74 1059 aaPredicted RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 HGSNATQ68CP4 663 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 TXNDC11Q6PKC3 985 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 ARHGAP27Q6ZUM4 889 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 SYT9Q86SS6 491 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 FAM35AQ86V20 835 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 SULF2Q8IWU5 870 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 CCDC191Q8NCU4 936 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 EYA3Q99504 573 aa4.47□□□□□ -1.69
RBM39-201ENST00000253363 RTFDC1Q9BY42 306 aaPredicted RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 SH2B1Q9NRF2 756 aaPredicted RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 GNL3LQ9NVN8 582 aaKnown RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 POLR3KQ9Y2Y1 108 aaPredicted RBP4.47□□□□□ -1.69
RBM39-201ENST00000253363 GLTPD2A6NH11 291 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 CDC45O75419 566 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 WDHD1O75717 1129 aaPredicted RBP4.46□□□□□ -1.7
RBM39-201ENST00000253363 B3GALT4O96024 378 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 HOXD8P13378 290 aaPredicted RBP4.46□□□□□ -1.7
RBM39-201ENST00000253363 FGFR3P22607 806 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 RPS12P25398 132 aaKnown RBP4.46□□□□□ -1.7
RBM39-201ENST00000253363 RPS26P62854 115 aaKnown RBP4.46□□□□□ -1.7
RBM39-201ENST00000253363 ERICH6BQ5W0A0 696 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 MRM1Q6IN84 353 aaKnown RBP4.46□□□□□ -1.7
RBM39-201ENST00000253363 C6orf15Q6UXA7 325 aaPredicted RBP4.46□□□□□ -1.7
RBM39-201ENST00000253363 PNMA8AQ86V59 439 aaPredicted RBP4.46□□□□□ -1.7
RBM39-201ENST00000253363 AMIGO3Q86WK7 504 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 BSNDQ8WZ55 320 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 ISCA1Q9BUE6 129 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 UBE2OQ9C0C9 1292 aaKnown RBP4.46□□□□□ -1.7
RBM39-201ENST00000253363 ATP13A2Q9NQ11 1180 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 ACTR10Q9NZ32 417 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 ZNRF3Q9ULT6 936 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 PCDHB14Q9Y5E9 798 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms