RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 CNTN2Q02246 1040 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 QRICH1Q2TAL8 776 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 MAP3K14Q99558 947 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 TINF2Q9BSI4 451 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 RIOX1Q9H6W3 641 aa16.59■□□□□ 0.25
CNN1-201ENST00000252456 PDE4DIPQ5VU43 2346 aa16.58■□□□□ 0.25
CNN1-201ENST00000252456 PPP1R11O60927 126 aaPredicted RBP16.58■□□□□ 0.24
CNN1-201ENST00000252456 LHX8Q68G74 356 aa16.58■□□□□ 0.24
CNN1-201ENST00000252456 MAMDC4Q6UXC1 1216 aa16.58■□□□□ 0.24
CNN1-201ENST00000252456 UBE2Q1Q7Z7E8 422 aa16.58■□□□□ 0.24
CNN1-201ENST00000252456 TMTC2Q8N394 836 aa16.58■□□□□ 0.24
CNN1-201ENST00000252456 JAKMIP1Q96N16 626 aaKnown RBP16.58■□□□□ 0.24
CNN1-201ENST00000252456 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
CNN1-201ENST00000252456 CYP39A1Q9NYL5 469 aa16.58■□□□□ 0.24
CNN1-201ENST00000252456 DNAH12Q6ZR08 3092 aa16.58■□□□□ 0.24
CNN1-201ENST00000252456 PFASO15067 1338 aa16.57■□□□□ 0.24
CNN1-201ENST00000252456 RXRAP19793 462 aa16.57■□□□□ 0.24
CNN1-201ENST00000252456 MLLT1Q03111 559 aaPredicted RBP16.57■□□□□ 0.24
CNN1-201ENST00000252456 USH1GQ495M9 461 aa16.57■□□□□ 0.24
CNN1-201ENST00000252456 PRAMEF19Q5SWL8 479 aa16.57■□□□□ 0.24
CNN1-201ENST00000252456 ZNF467Q7Z7K2 595 aaPredicted RBP16.57■□□□□ 0.24
CNN1-201ENST00000252456 NUP133Q8WUM0 1156 aa16.57■□□□□ 0.24
CNN1-201ENST00000252456 PNMA2Q9UL42 364 aa16.57■□□□□ 0.24
CNN1-201ENST00000252456 SOWAHBA6NEL2 793 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 CCDC69A6NI79 296 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 DHX16O60231 1041 aaKnown RBP16.56■□□□□ 0.24
CNN1-201ENST00000252456 SNAI1O95863 264 aaPredicted RBP16.56■□□□□ 0.24
CNN1-201ENST00000252456 HMGB1P09429 215 aaKnown RBP16.56■□□□□ 0.24
CNN1-201ENST00000252456 APOA5Q6Q788 366 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 NSMFQ6X4W1 530 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 NFXL1Q6ZNB6 911 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 PURBQ96QR8 312 aaKnown RBP16.56■□□□□ 0.24
CNN1-201ENST00000252456 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 SYNGAP1Q96PV0 1343 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 POTEB2H3BUK9 544 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 MNX1P50219 401 aaPredicted RBP16.56■□□□□ 0.24
CNN1-201ENST00000252456 SLC30A10Q6XR72 485 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 MSL3Q8N5Y2 521 aaKnown RBP16.56■□□□□ 0.24
CNN1-201ENST00000252456 PIGSQ96S52 555 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 OGDHLQ9ULD0 1010 aa16.56■□□□□ 0.24
CNN1-201ENST00000252456 OPLAHO14841 1288 aa16.55■□□□□ 0.24
CNN1-201ENST00000252456 ZBTB5O15062 677 aa16.55■□□□□ 0.24
CNN1-201ENST00000252456 PLEKHA8P1O95397 391 aa16.55■□□□□ 0.24
CNN1-201ENST00000252456 ZNF865P0CJ78 1059 aaPredicted RBP16.55■□□□□ 0.24
CNN1-201ENST00000252456 RPS6KB1P23443 525 aa16.55■□□□□ 0.24
CNN1-201ENST00000252456 BAATQ14032 418 aaPredicted RBP16.55■□□□□ 0.24
CNN1-201ENST00000252456 FBXO11Q86XK2 927 aa16.55■□□□□ 0.24
CNN1-201ENST00000252456 CTCFLQ8NI51 663 aaPredicted RBP16.55■□□□□ 0.24
CNN1-201ENST00000252456 AGXT2Q9BYV1 514 aa16.55■□□□□ 0.24
CNN1-201ENST00000252456 NRBP1Q9UHY1 535 aa16.55■□□□□ 0.24
CNN1-201ENST00000252456 SLC12A7Q9Y666 1083 aa16.55■□□□□ 0.24
CNN1-201ENST00000252456 DDX49Q9Y6V7 483 aaKnown RBP16.55■□□□□ 0.24
CNN1-201ENST00000252456 SEPT4O43236 478 aa16.54■□□□□ 0.24
CNN1-201ENST00000252456 KIF5BP33176 963 aa16.54■□□□□ 0.24
CNN1-201ENST00000252456 BLOC1S2Q6QNY1 142 aa16.54■□□□□ 0.24
CNN1-201ENST00000252456 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
CNN1-201ENST00000252456 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
CNN1-201ENST00000252456 CCDC144CPQ8IYA2 1237 aa16.54■□□□□ 0.24
CNN1-201ENST00000252456 FBXL16Q8N461 479 aa16.54■□□□□ 0.24
CNN1-201ENST00000252456 SRBD1Q8N5C6 995 aaKnown RBP16.54■□□□□ 0.24
CNN1-201ENST00000252456 TBC1D5Q92609 795 aa16.54■□□□□ 0.24
CNN1-201ENST00000252456 SPZ1Q9BXG8 430 aa16.54■□□□□ 0.24
CNN1-201ENST00000252456 KATNBL1Q9H079 304 aa16.54■□□□□ 0.24
CNN1-201ENST00000252456 DDX20Q9UHI6 824 aaKnown RBP16.54■□□□□ 0.24
CNN1-201ENST00000252456 ABCB11O95342 1321 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 SEC24BO95487 1268 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 TFRCP02786 760 aaKnown RBP16.53■□□□□ 0.24
CNN1-201ENST00000252456 CALM1P0DP23 149 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 CALM2P0DP24 149 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 CALM3P0DP25 149 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
CNN1-201ENST00000252456 CNGA1P29973 690 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 RPS6P62753 249 aaKnown RBP16.53■□□□□ 0.24
CNN1-201ENST00000252456 ARMCX2Q7L311 632 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 CMTR1Q8N1G2 835 aaKnown RBP16.53■□□□□ 0.24
CNN1-201ENST00000252456 FANCBQ8NB91 859 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 AMNQ9BXJ7 453 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 ZSWIM6Q9HCJ5 1215 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.53■□□□□ 0.24
CNN1-201ENST00000252456 ALPK3Q96L96 1907 aa16.53■□□□□ 0.24
CNN1-201ENST00000252456 PTPDC1A2A3K4 754 aa16.52■□□□□ 0.24
CNN1-201ENST00000252456 FARP2O94887 1054 aaPredicted RBP16.52■□□□□ 0.24
CNN1-201ENST00000252456 CAPN2P17655 700 aa16.52■□□□□ 0.24
CNN1-201ENST00000252456 SMARCA1P28370 1054 aa16.52■□□□□ 0.24
CNN1-201ENST00000252456 ANO1Q5XXA6 986 aa16.52■□□□□ 0.24
CNN1-201ENST00000252456 RNF207Q6ZRF8 634 aa16.52■□□□□ 0.24
CNN1-201ENST00000252456 Q6ZUG5 572 aa16.52■□□□□ 0.24
CNN1-201ENST00000252456 RGS22Q8NE09 1264 aa16.52■□□□□ 0.24
CNN1-201ENST00000252456 DIS3LQ8TF46 1054 aaKnown RBP16.52■□□□□ 0.24
CNN1-201ENST00000252456 PNMA6FA0A0J9YX94 578 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 KLF18A0A0U1RQI7 1052 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 MSCO60682 206 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 PSMA5P28066 241 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 GHRHRQ02643 423 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 C8orf34Q49A92 452 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 TMTC3Q6ZXV5 915 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 ANKLE1Q8NAG6 615 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 MORC4Q8TE76 937 aa16.52■□□□□ 0.23
CNN1-201ENST00000252456 LZTS2Q9BRK4 669 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms