RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 USP17L19D6RCP7 530 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 USP17L20D6RJB6 530 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 TEX33O43247 280 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 RPN1P04843 607 aaKnown RBP16.63■□□□□ 0.25
MBD4-201ENST00000249910 TAL1P17542 331 aaPredicted RBP16.63■□□□□ 0.25
MBD4-201ENST00000249910 HDLBPQ00341 1268 aaKnown RBP16.63■□□□□ 0.25
MBD4-201ENST00000249910 ICA1Q05084 483 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 USP17L24Q0WX57 530 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 USP17L6PQ6QN14 398 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 SPICE1Q8N0Z3 855 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 ZNF592Q92610 1267 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 EEF2KMTQ96G04 330 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 SYNRGQ9UMZ2 1314 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 PSMD14O00487 310 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 ZBTB5O15062 677 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 CBFA2T2O43439 604 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 GTPBP6O43824 516 aaPredicted RBP16.62■□□□□ 0.25
MBD4-201ENST00000249910 GH2P01242 217 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 DPEP1P16444 411 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 PLCG1P19174 1290 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 GPATCH4Q5T3I0 446 aaKnown RBP16.62■□□□□ 0.25
MBD4-201ENST00000249910 SLFN13Q68D06 897 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 CDAN1Q8IWY9 1227 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 LARGE2Q8N3Y3 721 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 KANSL2Q9H9L4 492 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 MYO3BQ8WXR4 1341 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 FKBP1AP62942 108 aaKnown RBP16.62■□□□□ 0.25
MBD4-201ENST00000249910 E4F1Q66K89 784 aaPredicted RBP16.62■□□□□ 0.25
MBD4-201ENST00000249910 TATDN1Q6P1N9 297 aa16.62■□□□□ 0.25
MBD4-201ENST00000249910 TNS1Q9HBL0 1735 aaKnown RBP16.62■□□□□ 0.25
MBD4-201ENST00000249910 ESYT2A0FGR8 921 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 CHRM1P11229 460 aaPredicted RBP16.61■□□□□ 0.25
MBD4-201ENST00000249910 KCNA3P22001 575 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 ADKP55263 362 aaKnown RBP16.61■□□□□ 0.25
MBD4-201ENST00000249910 SPATA1Q5VX52 437 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 CABP7Q86V35 215 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 PSTPIP2Q9H939 334 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 POTEMA6NI47 508 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 F5H6K3 240 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 LAD1O00515 517 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 PRPHP41219 470 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 PRCPP42785 496 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 TERF1P54274 439 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 KLRC3Q07444 240 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 ABCB5Q2M3G0 1257 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 QRICH1Q2TAL8 776 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 CCSER1Q9C0I3 900 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
MBD4-201ENST00000249910 QSER1Q2KHR3 1735 aa16.61■□□□□ 0.25
MBD4-201ENST00000249910 APTXQ7Z2E3 356 aaKnown RBP16.6■□□□□ 0.25
MBD4-201ENST00000249910 CCAR2Q8N163 923 aaKnown RBP16.6■□□□□ 0.25
MBD4-201ENST00000249910 CCDC150Q8NCX0 1101 aa16.6■□□□□ 0.25
MBD4-201ENST00000249910 MMTAG2Q9BU76 263 aaKnown RBP16.6■□□□□ 0.25
MBD4-201ENST00000249910 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
MBD4-201ENST00000249910 A0A1W2PRG0 241 aa16.6■□□□□ 0.25
MBD4-201ENST00000249910 TRIM49BA6NDI0 452 aa16.6■□□□□ 0.25
MBD4-201ENST00000249910 RIOK3O14730 519 aaKnown RBP16.6■□□□□ 0.25
MBD4-201ENST00000249910 IKQ13123 557 aaPredicted RBP16.6■□□□□ 0.25
MBD4-201ENST00000249910 CALCRLQ16602 461 aa16.6■□□□□ 0.25
MBD4-201ENST00000249910 CC2D2BQ6DHV5 1058 aa16.6■□□□□ 0.25
MBD4-201ENST00000249910 RIC8AQ9NPQ8 531 aa16.6■□□□□ 0.25
MBD4-201ENST00000249910 CCT6AP40227 531 aaKnown RBP16.59■□□□□ 0.25
MBD4-201ENST00000249910 NR1I3Q14994 352 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 KMT5BQ4FZB7 885 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 MYRIPQ8NFW9 859 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 MKL1Q969V6 931 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 MTMR9Q96QG7 549 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 NUDT12Q9BQG2 462 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 PYM1Q9BRP8 204 aaKnown RBP16.59■□□□□ 0.25
MBD4-201ENST00000249910 KBTBD4Q9NVX7 518 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 TMEM51Q9NW97 253 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 MYH8P13535 1937 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 ECE1P42892 770 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 PMS1P54277 932 aaKnown RBP16.59■□□□□ 0.25
MBD4-201ENST00000249910 USH1GQ495M9 461 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 ZNF658Q5TYW1 1059 aaPredicted RBP16.59■□□□□ 0.25
MBD4-201ENST00000249910 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
MBD4-201ENST00000249910 NELFBQ8WX92 580 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 CUL5Q93034 780 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 HPS3Q969F9 1004 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 PRIMPOLQ96LW4 560 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 MAP7D2Q96T17 732 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 VEZTQ9HBM0 779 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 NYAP2Q9P242 653 aa16.59■□□□□ 0.25
MBD4-201ENST00000249910 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 hCG_1984214I3L0E3 225 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 NDUFB10O96000 172 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 SPDYE6P0CI01 402 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 CDC37Q16543 378 aaPredicted RBP16.58■□□□□ 0.25
MBD4-201ENST00000249910 CCDC93Q567U6 631 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 UTP14CQ5TAP6 766 aaKnown RBP16.58■□□□□ 0.25
MBD4-201ENST00000249910 SPECC1LQ69YQ0 1117 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 RSBN1LQ6PCB5 846 aaPredicted RBP16.58■□□□□ 0.25
MBD4-201ENST00000249910 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 MIGA2Q7L4E1 593 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 ZNF713Q8N859 430 aaPredicted RBP16.58■□□□□ 0.25
MBD4-201ENST00000249910 IGSF22Q8N9C0 903 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 SUPT20HQ8NEM7 779 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 CPLX3Q8WVH0 158 aa16.58■□□□□ 0.25
MBD4-201ENST00000249910 KLRC4O43908 158 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms