RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 KCNJ14Q9UNX9 436 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 MRPL11Q9Y3B7 192 aaKnown RBP14.85□□□□□ -0.03
LSM8-201ENST00000249299 TLL2Q9Y6L7 1015 aa14.85□□□□□ -0.03
LSM8-201ENST00000249299 MORC2Q9Y6X9 1032 aaPredicted RBP14.85□□□□□ -0.03
LSM8-201ENST00000249299 ABCB11O95342 1321 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 SMCO2A6NFE2 343 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 BTBD18B2RXH4 712 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 PIK3CDO00329 1044 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 PPP1R11O60927 126 aaPredicted RBP14.84□□□□□ -0.03
LSM8-201ENST00000249299 DTNBO60941 627 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 BAG4O95429 457 aaKnown RBP14.84□□□□□ -0.03
LSM8-201ENST00000249299 YY1P25490 414 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 KRT85P78386 507 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 GUCY1B3Q02153 619 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 GHRHRQ02643 423 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 FMR1Q06787 632 aaKnown RBP eCLIP14.84□□□□□ -0.03
LSM8-201ENST00000249299 MOGSQ13724 837 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 TKFCQ3LXA3 575 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 OTUD7BQ6GQQ9 843 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 TYW1BQ6NUM6 668 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 PIBF1Q8WXW3 757 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 GPKOWQ92917 476 aaPredicted RBP eCLIP14.84□□□□□ -0.03
LSM8-201ENST00000249299 CUL5Q93034 780 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 TNFRSF25Q93038 417 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 CCDC102AQ96A19 550 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 SHISA4Q96DD7 197 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 SCAND2PQ9GZW5 306 aaPredicted RBP14.84□□□□□ -0.03
LSM8-201ENST00000249299 GJB4Q9NTQ9 266 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 FBXO28Q9NVF7 368 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 PNMA3Q9UL41 463 aa14.84□□□□□ -0.03
LSM8-201ENST00000249299 CTDP1Q9Y5B0 961 aaPredicted RBP14.84□□□□□ -0.03
LSM8-201ENST00000249299 OTOFQ9HC10 1997 aa14.83□□□□□ -0.03
LSM8-201ENST00000249299 TESPA1A2RU30 521 aaPredicted RBP14.83□□□□□ -0.04
LSM8-201ENST00000249299 TMEM88BA6NKF7 163 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 FOSP01100 380 aaPredicted RBP14.83□□□□□ -0.04
LSM8-201ENST00000249299 OSBPP22059 807 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 GJA5P36382 358 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 ADCY7P51828 1080 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 MYSM1Q5VVJ2 828 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 RGMBQ6NW40 437 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 KRT25Q7Z3Z0 450 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 ANKRD23Q86SG2 305 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 FERMT3Q86UX7 667 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 MS4A4AQ96JQ5 239 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 PSTPIP2Q9H939 334 aa14.83□□□□□ -0.04
LSM8-201ENST00000249299 MANSC4A6NHS7 340 aaPredicted RBP14.82□□□□□ -0.04
LSM8-201ENST00000249299 DDX11L8A8MPP1 907 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 BMP15O95972 392 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 COPB2P35606 906 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 IRX3P78415 501 aaPredicted RBP14.82□□□□□ -0.04
LSM8-201ENST00000249299 AP3B2Q13367 1082 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 ORC2Q13416 577 aaPredicted RBP14.82□□□□□ -0.04
LSM8-201ENST00000249299 GADL1Q6ZQY3 521 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 MCF2L2Q86YR7 1114 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 REXO1Q8N1G1 1221 aaKnown RBP14.82□□□□□ -0.04
LSM8-201ENST00000249299 TMEM87AQ8NBN3 555 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 ZNF784Q8NCA9 323 aaPredicted RBP14.82□□□□□ -0.04
LSM8-201ENST00000249299 REPS2Q8NFH8 660 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 COA7Q96BR5 231 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 POLR3EQ9NVU0 708 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 NOL7Q9UMY1 257 aaKnown RBP14.82□□□□□ -0.04
LSM8-201ENST00000249299 ZNF536O15090 1300 aa14.82□□□□□ -0.04
LSM8-201ENST00000249299 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
LSM8-201ENST00000249299 RIOK3O14730 519 aaKnown RBP14.81□□□□□ -0.04
LSM8-201ENST00000249299 CLK2P49760 499 aaKnown RBP14.81□□□□□ -0.04
LSM8-201ENST00000249299 GPAT2Q6NUI2 795 aa14.81□□□□□ -0.04
LSM8-201ENST00000249299 ATG4CQ96DT6 458 aa14.81□□□□□ -0.04
LSM8-201ENST00000249299 TEX13BQ9BXU2 312 aa14.81□□□□□ -0.04
LSM8-201ENST00000249299 ASCC2Q9H1I8 757 aaPredicted RBP14.81□□□□□ -0.04
LSM8-201ENST00000249299 ELP1O95163 1332 aa14.81□□□□□ -0.04
LSM8-201ENST00000249299 TRPM7Q96QT4 1865 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 CCDC194A0A1B0GVG4 234 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 KIF28PB7ZC32 967 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 YEATS4O95619 227 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 SLC10A3P09131 477 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 ZNF157P51786 506 aaPredicted RBP14.8□□□□□ -0.04
LSM8-201ENST00000249299 FOSBP53539 338 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 NR5A1Q13285 461 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 TREML2Q5T2D2 321 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 FOXD4L5Q5VV16 416 aaPredicted RBP14.8□□□□□ -0.04
LSM8-201ENST00000249299 RASAL3Q86YV0 1011 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 FOXD4L4Q8WXT5 416 aaPredicted RBP14.8□□□□□ -0.04
LSM8-201ENST00000249299 NAP1L4Q99733 375 aaKnown RBP14.8□□□□□ -0.04
LSM8-201ENST00000249299 RTEL1Q9NZ71 1219 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 ZNF214Q9UL59 606 aaPredicted RBP14.8□□□□□ -0.04
LSM8-201ENST00000249299 CCPG1Q9ULG6 757 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 PCDHA6Q9UN73 950 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 CEP131Q9UPN4 1083 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 PCDHA8Q9Y5H6 950 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 LOC285556D6RIA3 1793 aa14.8□□□□□ -0.04
LSM8-201ENST00000249299 CCL15-CCL14A0A0B4J2E2 113 aa14.79□□□□□ -0.04
LSM8-201ENST00000249299 MCM4P33991 863 aa14.79□□□□□ -0.04
LSM8-201ENST00000249299 GCLCP48506 637 aaPredicted RBP14.79□□□□□ -0.04
LSM8-201ENST00000249299 NASPP49321 788 aaPredicted RBP14.79□□□□□ -0.04
LSM8-201ENST00000249299 DNM1Q05193 864 aaKnown RBP14.79□□□□□ -0.04
LSM8-201ENST00000249299 DGKZQ13574 1117 aa14.79□□□□□ -0.04
LSM8-201ENST00000249299 NONOQ15233 471 aaKnown RBP eCLIP14.79□□□□□ -0.04
LSM8-201ENST00000249299 CCL15Q16663 113 aa14.79□□□□□ -0.04
LSM8-201ENST00000249299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.79□□□□□ -0.04
LSM8-201ENST00000249299 CHST13Q8NET6 341 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms