RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 STAMBPO95630 424 aa17.47■□□□□ 0.39
SIN3B-201ENST00000248054 MYCLP12524 364 aaPredicted RBP17.47■□□□□ 0.39
SIN3B-201ENST00000248054 CTNNA2P26232 953 aa17.47■□□□□ 0.39
SIN3B-201ENST00000248054 TMEM179Q6ZVK1 233 aa17.47■□□□□ 0.39
SIN3B-201ENST00000248054 DYNLL2Q96FJ2 89 aa17.47■□□□□ 0.39
SIN3B-201ENST00000248054 RRP15Q9Y3B9 282 aaKnown RBP17.47■□□□□ 0.39
SIN3B-201ENST00000248054 STX10O60499 249 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 KRT9P35527 623 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 KARSQ15046 597 aaKnown RBP17.46■□□□□ 0.39
SIN3B-201ENST00000248054 KMT5BQ4FZB7 885 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 PUF60Q9UHX1 559 aaKnown RBP17.46■□□□□ 0.39
SIN3B-201ENST00000248054 BMP3P12645 472 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 SLC9C1Q4G0N8 1177 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 OTUD6AQ7L8S5 288 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 DCAF4Q8WV16 495 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 SALL3Q9BXA9 1300 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 KCNJ18B7U540 433 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 EBAG9O00559 213 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 KCNJ12Q14500 433 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 MSANTD4Q8NCY6 345 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 PNMA6FA0A0J9YX94 578 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 TNNC1P63316 161 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 PRR16Q569H4 304 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 C6orf163Q5TEZ5 329 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 PPP1R18Q6NYC8 613 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 GPBP1Q86WP2 473 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 MYCT1Q8N699 235 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 PCDHB13Q9Y5F0 798 aa17.46■□□□□ 0.39
SIN3B-201ENST00000248054 TNS2Q63HR2 1409 aa17.46■□□□□ 0.38
SIN3B-201ENST00000248054 PFKFB3Q16875 520 aaPredicted RBP17.45■□□□□ 0.38
SIN3B-201ENST00000248054 KCNB2Q92953 911 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 KAZALD1Q96I82 304 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 SBK1Q52WX2 424 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 MIER3Q7Z3K6 550 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 FAM160B2Q86V87 743 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 TRMT44Q8IYL2 757 aaKnown RBP17.45■□□□□ 0.38
SIN3B-201ENST00000248054 KIFAP3Q92845 792 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 FERMT1Q9BQL6 677 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 TEKT3Q9BXF9 490 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 MRPL44Q9H9J2 332 aaKnown RBP17.45■□□□□ 0.38
SIN3B-201ENST00000248054 PABPC4Q13310 644 aaKnown RBP eCLIP17.45■□□□□ 0.38
SIN3B-201ENST00000248054 ENAHQ8N8S7 591 aaPredicted RBP17.45■□□□□ 0.38
SIN3B-201ENST00000248054 STAMQ92783 540 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 DHTKD1Q96HY7 919 aaPredicted RBP17.45■□□□□ 0.38
SIN3B-201ENST00000248054 GPHNQ9NQX3 736 aaPredicted RBP17.45■□□□□ 0.38
SIN3B-201ENST00000248054 PKD2L1Q9P0L9 805 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 MYO1CO00159 1063 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 STRN3Q13033 797 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 NR5A1Q13285 461 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 SEPT2Q15019 361 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 SLFNL1Q499Z3 407 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 CDAN1Q8IWY9 1227 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 ANKS4BQ8N8V4 417 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 PIGSQ96S52 555 aa17.45■□□□□ 0.38
SIN3B-201ENST00000248054 H0YCG3 227 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 SNAP23O00161 211 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 MAP2K2P36507 400 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 GPSM2P81274 684 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 ARID5AQ03989 594 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 RAPGEF1Q13905 1077 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 ASIC2Q16515 512 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 NSUN4Q96CB9 384 aaKnown RBP17.44■□□□□ 0.38
SIN3B-201ENST00000248054 NAPGQ99747 312 aaPredicted RBP17.44■□□□□ 0.38
SIN3B-201ENST00000248054 ST7Q9NRC1 585 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 ZDHHC9Q9Y397 364 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 COL4A3BPQ9Y5P4 624 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
SIN3B-201ENST00000248054 FNBP1Q96RU3 617 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 CRKP46108 304 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 WDR44Q5JSH3 913 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 LRRC8AQ8IWT6 810 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 GRM4Q14833 912 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 ICE2Q659A1 982 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 JRKLQ9Y4A0 524 aa17.44■□□□□ 0.38
SIN3B-201ENST00000248054 CCDC169A6NNP5 214 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 GCNT3O95395 438 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 PPP2R3AQ06190 1150 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 CACTINQ8WUQ7 758 aaKnown RBP17.43■□□□□ 0.38
SIN3B-201ENST00000248054 DALRD3Q5D0E6 543 aaKnown RBP17.43■□□□□ 0.38
SIN3B-201ENST00000248054 RESP18Q5W5W9 173 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 STOX1Q6ZVD7 989 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 CEP83Q9Y592 693 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 PTPREP23469 700 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 ACTN2P35609 894 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 SYDE2Q5VT97 1194 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 GBP6Q6ZN66 633 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 PLA2G4DQ86XP0 818 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 TBCKQ8TEA7 893 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 SLC10A5Q5PT55 438 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 SLC17A8Q8NDX2 589 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 METTL14Q9HCE5 456 aaKnown RBP17.43■□□□□ 0.38
SIN3B-201ENST00000248054 FANCLQ9NW38 375 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 IVNS1ABPQ9Y6Y0 642 aa17.43■□□□□ 0.38
SIN3B-201ENST00000248054 TPH2Q8IWU9 490 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 OR8K1Q8NGG5 319 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 LARP4BQ92615 738 aaKnown RBP17.42■□□□□ 0.38
SIN3B-201ENST00000248054 PANK4Q9NVE7 773 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 BCL9O00512 1426 aa17.42■□□□□ 0.38
SIN3B-201ENST00000248054 EEF1GP26641 437 aaKnown RBP17.42■□□□□ 0.38
SIN3B-201ENST00000248054 CIAPIN1Q6FI81 312 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms