RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 RRP36Q96EU6 259 aaKnown RBP24.28■■□□□ 1.48
SH2D3A-201ENST00000245908 TTC26A0AVF1 554 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 SMCO2A6NFE2 343 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 TULP2O00295 520 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 PIP4K2BP78356 416 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 TXNRD1Q16881 649 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 DNAJC7Q99615 494 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 NAPGQ99747 312 aaPredicted RBP24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 UBXN6Q9BZV1 441 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 CCNT1O60563 726 aaKnown RBP24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 ABL1P00519 1130 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 ATP2B4P23634 1241 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 NOVP48745 357 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 LETM2Q2VYF4 491 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 NEK8Q86SG6 692 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 OR8K1Q8NGG5 319 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 SLF1Q9BQI6 1058 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 ARFGAP3Q9NP61 516 aa24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 MAGEC2Q9UBF1 373 aaPredicted RBP24.27■■□□□ 1.48
SH2D3A-201ENST00000245908 UFL1O94874 794 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 ORC2Q13416 577 aaPredicted RBP24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 PRR5LQ6MZQ0 368 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 CHP1Q99653 195 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 DUSP9Q99956 384 aaKnown RBP24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 C7orf25Q9BPX7 421 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 TRIM9Q9C026 710 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 CAPN11Q9UMQ6 739 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 FOCADQ5VW36 1801 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 SASH3O75995 380 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 NDUFA10O95299 355 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 RHBDL3P58872 404 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 TUBB4BP68371 445 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 USP17L2Q6R6M4 530 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 CERKQ8TCT0 537 aa24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 RPGRQ92834 1020 aaKnown RBP24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 CCDC47Q96A33 483 aaKnown RBP24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 FAM163AQ96GL9 167 aaPredicted RBP24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 EPN1Q9Y6I3 576 aaPredicted RBP24.26■■□□□ 1.47
SH2D3A-201ENST00000245908 CCDC151A5D8V7 595 aa24.25■■□□□ 1.47
SH2D3A-201ENST00000245908 DNM2P50570 870 aa24.25■■□□□ 1.47
SH2D3A-201ENST00000245908 BRD3Q15059 726 aa24.25■■□□□ 1.47
SH2D3A-201ENST00000245908 SEC63Q9UGP8 760 aaKnown RBP24.25■■□□□ 1.47
SH2D3A-201ENST00000245908 LUC7L2Q9Y383 392 aaKnown RBP24.25■■□□□ 1.47
SH2D3A-201ENST00000245908 REXO2Q9Y3B8 237 aaKnown RBP24.25■■□□□ 1.47
SH2D3A-201ENST00000245908 CCNE1P24864 410 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 CRY2Q49AN0 593 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 SOGA3Q5TF21 947 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 FNBP4Q8N3X1 1017 aaPredicted RBP24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 CEP95Q96GE4 821 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 ZSWIM4Q9H7M6 989 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 PUF60Q9UHX1 559 aaKnown RBP24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 GAKO14976 1311 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 ESYT2A0FGR8 921 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 POTEB2H3BUK9 544 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 SRGNP10124 158 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 PPP1R2P41236 205 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 FAM182BQ5T319 152 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 FAM196AQ6ZSG2 479 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 P2RX5Q93086 422 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 EXOC1Q9NV70 894 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 GGA1Q9UJY5 639 aa24.24■■□□□ 1.47
SH2D3A-201ENST00000245908 BICDL2A1A5D9 508 aa24.23■■□□□ 1.47
SH2D3A-201ENST00000245908 PDE4DQ08499 809 aa24.23■■□□□ 1.47
SH2D3A-201ENST00000245908 WHAMMP3Q1A5X7 153 aa24.23■■□□□ 1.47
SH2D3A-201ENST00000245908 CSGALNACT2Q8N6G5 542 aa24.23■■□□□ 1.47
SH2D3A-201ENST00000245908 MSANTD4Q8NCY6 345 aa24.23■■□□□ 1.47
SH2D3A-201ENST00000245908 ANKZF1Q9H8Y5 726 aa24.23■■□□□ 1.47
SH2D3A-201ENST00000245908 SLF2Q8IX21 1173 aa24.23■■□□□ 1.47
SH2D3A-201ENST00000245908 PIGSQ96S52 555 aa24.23■■□□□ 1.47
SH2D3A-201ENST00000245908 TUBGCP2Q9BSJ2 902 aa24.23■■□□□ 1.47
SH2D3A-201ENST00000245908 COBLL1Q53SF7 1204 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 TBCKQ8TEA7 893 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 MMTAG2Q9BU76 263 aaKnown RBP24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 FUT8Q9BYC5 575 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 TTYH3Q9C0H2 523 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 RIOX1Q9H6W3 641 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 PLIN4Q96Q06 1357 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 hCG_1984214I3L0E3 225 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 PES1O00541 588 aaKnown RBP24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 TOM1O60784 492 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 CYP2C19P33261 490 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 ASIC1P78348 528 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 AMPD3Q01432 767 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 MEA1Q16626 185 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 WDR59Q6PJI9 974 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 ZNF713Q8N859 430 aaPredicted RBP24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 TSPYL1Q9H0U9 437 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 RAB21Q9UL25 225 aa24.22■■□□□ 1.47
SH2D3A-201ENST00000245908 B4DLN1 442 aa24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 AMPD2Q01433 879 aa24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 MFSD14BQ5SR56 506 aa24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 FAM114A1Q8IWE2 563 aa24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 REXO1Q8N1G1 1221 aaKnown RBP24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 HNRNPLLQ8WVV9 542 aaKnown RBP24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 ADRA2BP18089 450 aa24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 TECP42680 631 aa24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 STK4Q13043 487 aa24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 TSR1Q2NL82 804 aaKnown RBP24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 ANKRD40Q6AI12 368 aa24.21■■□□□ 1.47
SH2D3A-201ENST00000245908 RETREG2Q8NC44 543 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms