RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CFAP61Q8NHU2 1237 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 PIP4K2CQ8TBX8 421 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 DYNLT1P63172 113 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 RFX6Q8HWS3 928 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 CCDC138Q96M89 665 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 TSR3Q9UJK0 312 aaKnown RBP14.41□□□□□ -0.1
NEK9-201ENST00000238616 ZNF148Q9UQR1 794 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 SLC27A2O14975 620 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 TFAP4Q01664 338 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 ELF2Q15723 593 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 LZICQ8WZA0 190 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 ANKRD36BP1Q96IX9 119 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
NEK9-201ENST00000238616 WHAMMP3Q1A5X7 153 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 NAA35Q5VZE5 725 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 TMEM87BQ96K49 555 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 EVI5O60447 810 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 RNF40O75150 1001 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 KRT24Q2M2I5 525 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 GRK7Q8WTQ7 553 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 MAGEA1P43355 309 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 GNA14O95837 355 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 MAIP1Q8WWC4 291 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 EXT2Q93063 718 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 TTC25Q96NG3 672 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 KLHL14Q9P2G3 628 aa14.41□□□□□ -0.1
NEK9-201ENST00000238616 SCAF11Q99590 1463 aaKnown RBP14.41□□□□□ -0.1
NEK9-201ENST00000238616 EIF4A2Q14240 407 aaKnown RBP14.4□□□□□ -0.1
NEK9-201ENST00000238616 RAP1GDS1P52306 607 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 PABPC4Q13310 644 aaKnown RBP eCLIP14.4□□□□□ -0.1
NEK9-201ENST00000238616 NONOQ15233 471 aaKnown RBP eCLIP14.4□□□□□ -0.1
NEK9-201ENST00000238616 EPHB1P54762 984 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 OSTNP61366 133 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 YWHAGP61981 247 aaKnown RBP eCLIP14.4□□□□□ -0.1
NEK9-201ENST00000238616 SNX1Q13596 522 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 PDCD6IPQ8WUM4 868 aaKnown RBP14.4□□□□□ -0.1
NEK9-201ENST00000238616 LZTS2Q9BRK4 669 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 MAP3K7O43318 606 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 ALDH1L1O75891 902 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 ATF2P15336 505 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 ARHGDIAP52565 204 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 BFSP1Q12934 665 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 MTHFSDQ2M296 383 aaKnown RBP14.4□□□□□ -0.1
NEK9-201ENST00000238616 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 ADCY1Q08828 1119 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 MTMR3Q13615 1198 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 ARMCX5Q6P1M9 558 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 CHURC1Q8WUH1 139 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 CDKL2Q92772 493 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
NEK9-201ENST00000238616 OTULINQ96BN8 352 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 TNRQ92752 1358 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 EIF2AK4Q9P2K8 1649 aaKnown RBP14.4□□□□□ -0.1
NEK9-201ENST00000238616 PDE1BQ01064 536 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 FAM227BQ96M60 508 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 INTUQ9ULD6 942 aa14.4□□□□□ -0.1
NEK9-201ENST00000238616 POLR2MP0CAP2 368 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 FRA10AC1Q70Z53 315 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 ARHGAP6O43182 974 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 ACTN1P12814 892 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 ASPHQ12797 758 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 ANKRD44Q8N8A2 993 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 ZNF513Q8N8E2 541 aaPredicted RBP14.39□□□□□ -0.11
NEK9-201ENST00000238616 CCDC124Q96CT7 223 aaKnown RBP14.39□□□□□ -0.11
NEK9-201ENST00000238616 DCAF5Q96JK2 942 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 RPGRIP1Q96KN7 1286 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 FAF1Q9UNN5 650 aaPredicted RBP14.39□□□□□ -0.11
NEK9-201ENST00000238616 TUBBP07437 444 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 KRT25Q7Z3Z0 450 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 KCTD6Q8NC69 237 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 SDR42E1Q8WUS8 393 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 FAM149B1Q96BN6 582 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 CFAP36Q96G28 342 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 ELF1P32519 619 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 CAPRIN1Q14444 709 aaKnown RBP14.39□□□□□ -0.11
NEK9-201ENST00000238616 DPH5Q9H2P9 285 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 RIPOR2Q9Y4F9 1068 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 KCNA1Q09470 495 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 RNF219Q5W0B1 726 aaPredicted RBP14.39□□□□□ -0.11
NEK9-201ENST00000238616 RWDD4Q6NW29 188 aaKnown RBP14.39□□□□□ -0.11
NEK9-201ENST00000238616 BBS5Q8N3I7 341 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 TYW1Q9NV66 732 aaKnown RBP14.39□□□□□ -0.11
NEK9-201ENST00000238616 INO80B-WBP1J3KQ70 363 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 PEX19P40855 299 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 VCPP55072 806 aaKnown RBP14.39□□□□□ -0.11
NEK9-201ENST00000238616 INO80BQ9C086 356 aaPredicted RBP14.39□□□□□ -0.11
NEK9-201ENST00000238616 LINS1Q8NG48 757 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 ZKSCAN5Q9Y2L8 839 aa14.39□□□□□ -0.11
NEK9-201ENST00000238616 NSD2O96028 1365 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 TRPA1O75762 1119 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 FTOQ9C0B1 505 aaKnown RBP eCLIP14.38□□□□□ -0.11
NEK9-201ENST00000238616 ZSCAN32Q9NX65 697 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 RALGAPBQ86X10 1494 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 DISP3Q9P2K9 1392 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 ANXA13P27216 316 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 ARHGEF6Q15052 776 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 CEP19Q96LK0 163 aa14.38□□□□□ -0.11
NEK9-201ENST00000238616 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms